| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1094 |
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| Symbol | |
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| ID | 3968258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1402665 |
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| End bp | 1404212 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920162 |
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| Product | allophanate hydrolase subunit 2 |
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| Protein accession | YP_526568 |
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| Protein GI | 90020741 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.631655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.20774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAAA TAAAAAAAAT AATGATTGTG GGCGGTGGTA CTTCCGGTTG GATGACGGCA
GCCGCTCTGG CTAAGTTTCT AATTCCCCAC GGTATTGATA TCGAATTGAT CGAGTCGAGC
GCGATCAGCT CGGTTGGAGT AGGGGAGGCG ACTATTCCGC ATATTCGGGT GTTCAACGAT
ATGTTAGGAA TTGATGAAAA TGAATTTATT CGAGAGACGG GGGCCACCTA TAAGCTCGCG
ATACGGTTTG ATGGCTGGGG AGAAAAGAAT TCGTCTTATT TCCATCCGTT CGGTGTGAGT
GGGTTCCCCA TAAATGGTAT CGACTTTCAC CATTATTGGC TTCGCTTGAA GCAAGAGGCT
GAGGTTTCTG AATACGGTGC ATACTCTTTT GCTGCGGTTG CAGCAAATTT AAAACGTTTC
GGATACCCTG CCTCTAATCC CAACTCACCC GCGCATGATT TTAGTTATGC CTTCCATATT
GATGCGTCAA AGTATGCGTC TTTTCTTAAG TCTCGTGCGC TCGCTGCGGG TGTAACCTAT
ATCGATGGGA AAGTGACAGA GGTGACACGG GATAAAGAGG GTGCAATAAA TGCTGTTCAG
TTGGATTCTG GAGAGTTTTT TGTGGCAGAC TTTTTTATCG ATTGCTCGGG TTTTCGCTCG
TTACTGCTTG GTGAGTCTTT GGGGGTTGAG TTTGAGTCAT GGGCGAAATG GTTGCCCTGT
GATAGTGCTT ATGCTGTTCC TTCTGAAGCC CTTTCTTCGC CTCCGTCATA CACACTTTCT
AGTGCTCAGT TATCTGGGTG GCAATGGCGA ATACCGTTGC AGCACCGTAC TGGGAATGGT
TTGGTGTTTT CCTCGTCGCA TCAAACCAAC GAAAGTGCAC TAAGTACTTT ACTCGGCAAT
GTAAGCGAGC CTATTACAGC GGATCCCAAG TTGCTTCGTT TTGAAGCGGG GAAGCGTAAA
CAAAGTTGGG AAAAAAATTG CGTGGCAATA GGTTTGTCAG CGGGATTTCT TGAGCCGCTG
GAGTCGACGA GCTTGTATCT TGTTCAAGTC GCTGTGCAGA AATTTTTGGA GTTATTTTCC
TGTGAGGCGG CTATAGGTAC GACAGAAATG AACGCGTTCA ATTATTTGAT CAATATTGAG
TACGAGCGGA TTAGAGATTT TTTGGTGCTT CATTATTATG CTAATAATCG AAAAGATTCG
GATTTTTGGG CGGATTGTCG AGAAGTGGCA ATACCTAGTT CGTTAGAGGA GAAACTGGAA
ATTTTTAGGT GTGGAGCGGG TGTGGTGGAA TACCGTCATG GGTTGTTTAT GCCTGCTAGT
TGGCTGGCGG TTTATTTGGG ACAGGGGGTG GTGCCAGTAA CTTATGATCC ACGCTTGAAG
AAGATGCCTC TGGGTAAAAT GAAGGCTTTT TTGGCGCAAG TGGAATGGGA TGTGCAGAGG
GCTGTAGAAA GGTACGAGTC TCACTCGTTG TTTGTTTTGA GGGCTAACTC GAAAGCGAGC
GGAGCTTACC CTCCTGCATC TATGAGTTTG TATGGAGCCC CACGATGA
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| Protein sequence | MYKIKKIMIV GGGTSGWMTA AALAKFLIPH GIDIELIESS AISSVGVGEA TIPHIRVFND
MLGIDENEFI RETGATYKLA IRFDGWGEKN SSYFHPFGVS GFPINGIDFH HYWLRLKQEA
EVSEYGAYSF AAVAANLKRF GYPASNPNSP AHDFSYAFHI DASKYASFLK SRALAAGVTY
IDGKVTEVTR DKEGAINAVQ LDSGEFFVAD FFIDCSGFRS LLLGESLGVE FESWAKWLPC
DSAYAVPSEA LSSPPSYTLS SAQLSGWQWR IPLQHRTGNG LVFSSSHQTN ESALSTLLGN
VSEPITADPK LLRFEAGKRK QSWEKNCVAI GLSAGFLEPL ESTSLYLVQV AVQKFLELFS
CEAAIGTTEM NAFNYLINIE YERIRDFLVL HYYANNRKDS DFWADCREVA IPSSLEEKLE
IFRCGAGVVE YRHGLFMPAS WLAVYLGQGV VPVTYDPRLK KMPLGKMKAF LAQVEWDVQR
AVERYESHSL FVLRANSKAS GAYPPASMSL YGAPR
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