| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1073 |
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| Symbol | |
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| ID | 3968237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1373072 |
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| End bp | 1374787 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920141 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_526547 |
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| Protein GI | 90020720 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3176] Putative hemolysin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.475912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAACA TCGAACAAGC TGTTACTAAC AAGTTTCCTA AGTTTGCTAG CCAACCGGCT
ATTATCCGCA AACCTACACT CTCCCTCCTG CGCCGACTTA CCCACGAAAC TGAAATTAAT
GCCTTTTTGC GCGACAACCA AGATGCCATT GGCTTTGAGT TTATCGACCG CGTACTGGAA
TATTTCGACT TTAGCTATCG CGTAAGCGCT AGAGATAAAA GCAATATTCC CGCTGCTGGT
CGCGTAGTTA TTTTCGCCAA CCACCCCATT GGCTCTCTCG ATGGCTTAGC TATTTTGCGG
CTTATTGGCG AAGTGCGCCA AGATGTAAAA ATTATCGCTA ACGATATGCT CAGCCATTTC
TCTGCCCTAG ATAACCTGAT TATTCCACTG GATAACATGA CCGGCAGCAG TGCCCGCCGC
AGCTACAAGC GCGTAATGCA GGCACTAGAA AAAGAGCAGG CGATTATTGT ATTCCCTGCG
GGTGAGGTAT CCCGCGCCAG TGCTAATGGT GTGCGCGATT CTCGCTGGCT GCCCGGCTTT
TTACATTTTG CTCGCCGCGG CAAGGCGCCG TTGCTGCCGG TGCATATCAA AGCAAAAAAC
TCATTACTCT TTTACGGCGC CAGCATGCTG TTTAAGCCAC TTGGCACTGC ACTACTGGCA
AGAGAAATGT TTAACAAGCA ATCGCGCACC ATTAACTTTC GTGTCGGCGG TATGATTCCG
CCAGCGGCTT TAGAATCAGA CCAGTTACAC GATCGCACAC TAGTAAAACG TCTCAAAAAG
CATTTATATA AAGTTGGCTC GCAAAAACGC CCTATATTTC AAAGTGAACG CACCATAGCC
CACCCAGAAG ATCGTCAGCG TTTACAAGAG GAATTGCGCG ATGCAAAGCT ACTGGGCGAG
ACCCGAGACA ACAACCGCAT CTACTTAGTA AGTTACAAAC AAGATTCCGC AGTTATTCGC
GAGATTGGCC GCTTGCGCGA ACTCGCCTTT AGAAAAGTAG GTGAAGGTAC AGGTAAAAAG
CGCGATTTAG ATGCGTTCGA TAGCCACTAT AAGCATTTAG TATTGTGGGA TAGAGAAAAC
CTAAAAATTG CAGGCTCTTA TCGCCTAGGC GAGGGCAAAC ACATCTACGA TACACTTGGT
GAAAGCGGCT TTTACACCAG CACGCTATAT GACTTTAAAC CAGAATTTAA AAAATATTTA
GAGCAAGGTG TAGAGTTAGG CCGCAGCTTT GTAAACCCTG AATACTGGGG TAAAGCGAGC
CTTGATTATT TGTGGCAAGG GCTGGGAACA TTTTTAGCTA ACAACCCCGA AGTACGCTAT
TTAATTGGGC CAGTAAGTAT GAGCGCAGAT TACCCGCGCG AGCTTATGGA CCAACTGGTT
TATTTTTACC GCCGTTACTA TGCATGCCCC GAAAATTTAG CGGTAGCGAA TCACCCCTAT
ACTTTAACGG CCGAGCAAAA CGCAAAGTTT GAAGCTCTGT TTGAAAATAA AGAGCGCGAT
GAAGCCTTCG ATTTTATGCA GGCAAATTTT ATGGCAGTCG GCCACAAACT TCCTATGCTA
TTTAAACAAT ACACAGCACT CTTTGAAGAA GGTGGTTTTC AGTCGGTAGT ATTTAGCGTA
GACCCAGACT TTGGCGACTG CCTAGACGGT TTATGCATGT GCGACATTAC TAAGCTTAAA
GCCAGTAAAT ATAAGCGTTA TATTGGGGGG AAATAA
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| Protein sequence | MINIEQAVTN KFPKFASQPA IIRKPTLSLL RRLTHETEIN AFLRDNQDAI GFEFIDRVLE
YFDFSYRVSA RDKSNIPAAG RVVIFANHPI GSLDGLAILR LIGEVRQDVK IIANDMLSHF
SALDNLIIPL DNMTGSSARR SYKRVMQALE KEQAIIVFPA GEVSRASANG VRDSRWLPGF
LHFARRGKAP LLPVHIKAKN SLLFYGASML FKPLGTALLA REMFNKQSRT INFRVGGMIP
PAALESDQLH DRTLVKRLKK HLYKVGSQKR PIFQSERTIA HPEDRQRLQE ELRDAKLLGE
TRDNNRIYLV SYKQDSAVIR EIGRLRELAF RKVGEGTGKK RDLDAFDSHY KHLVLWDREN
LKIAGSYRLG EGKHIYDTLG ESGFYTSTLY DFKPEFKKYL EQGVELGRSF VNPEYWGKAS
LDYLWQGLGT FLANNPEVRY LIGPVSMSAD YPRELMDQLV YFYRRYYACP ENLAVANHPY
TLTAEQNAKF EALFENKERD EAFDFMQANF MAVGHKLPML FKQYTALFEE GGFQSVVFSV
DPDFGDCLDG LCMCDITKLK ASKYKRYIGG K
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