| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1045 |
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| Symbol | |
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| ID | 3967799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1332518 |
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| End bp | 1335586 |
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| Gene Length | 3069 bp |
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| Protein Length | 1022 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920112 |
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| Product | hypothetical protein |
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| Protein accession | YP_526519 |
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| Protein GI | 90020692 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.771071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGAC AAGATATAGT GCAAAACATG ATAGCTGCCC TAGGGCAAAG CCAGAGTCAG
CGGCTGCCCA GCGCGCTGGC CGAGCACTAT GTGGATATAG ACGATAGTAC AAGCGAAGAC
GTATACGTCT TTATCAAAAA GTTTTCTAGC CATGTCAATT TTTACCAAAA TAACCCAGAC
GCGCCGAGCG GAGATTGGCA AAACTTTTTT ACCTACTCCG AAGGCGAGGC AAAAAAATGG
CTAGACGCAC AAGGGCAAGC GGTGCCACCG CATATCGGTT TGCTCGATAC CTTTATTGAA
TTACTGCGTG AGCCAAAAGA CCTGCTTAAT CATTTTACCG CGCGGCATTT GCAATTTTAC
TATCGCGATA TTTTGCGTTT TAATCCCTTG CCACCGGTAG TAGATAAGGC ACATGTTATT
GTGCAATTAA AAAAGAATAC GCCTGCAGTA GCGCTTACTC CGCAGCATCA ATTTAGCGCG
GGTAAAGATG CAACGGGGAA AGAGCGGATT TATGCGCCTA CAGACACAAC TATTATTAAT
CATTCTGAAG TTAGCGATTT ATCTTCTATA TATTCAAACG CGTATAGCCT AGGGAAAATA
CACTTAGCGC CCATCGCCAA CTCTGCCGAT GGCGTGGGTG GCGACCTCGA CAAAGAGAGC
CCAAAATGGT CTGCATTCGG TAATAGCGAT ATGCCGCTGG CCGAAATAGG TTTTGCCATT
GCTTCGCCAT TGCTTTATTT GCAAGAAGGC GTGCGTACCA TTACTGCCGA TTTAACGCTC
AGCCAAATAT CTGCAAATAA TATAGCTAAT GCCAATTTAA GCGGGGCATT TAACGTATAT
CTCACGGCAC CTAAACAGTG GCTTGGCCCC ATTAGCGTAA CGCCTTCGTT GTTGGGCAGC
GTGTTGCGCT TGCAGTTTAG TTTGAGTGCA GAGCAAGAAG CCGTTGTTAA CTACAGTGCA
GCTATACACG GCCACAGTTT TCACGCCAGC GCGCCGGTTA TGCAAGTTTT GCTAAACAAC
GATAAACAAA ATATAGGCCC TGCTACTTTT AATAATTTAA TTATCGAAGC GGCAAAAATT
AGTGTAGATG TTAGCGGCGT TACGACATTA AAATTAGAAA ACGATACCGG CTCACTTAAC
CCCAAAAAAG CGTTTCAGCC ATTTTCTGCC CAGCCAGAAC GCGGAAGCCG ATTTATTATT
GGCAGTGATG AGGTTTTTTC GAAGCGCCTG CAAGAGGTAA AAATAAACCT TCTGTGGCAA
GTGCCGGCAA CCAACTTAGC AGCATACTAC GCCACCTATA AGCAACCCAT AGCCAACAAT
AGTTATTTTA CCGCAGGCGC AGCCCTGCAA GACGGTGAAG GGCGAGTATT AAGCGGCAGT
GCGCTCAACT TGTTTAACGC AACTAGTGCC GCTAGCGAGC AGTCTATTAC GCTTTCCGTG
TCGGGCAGCG CTGCATCTTC TACTTCCACT AATAGTAAGC AGGCGCAGGC GTTATTCCGT
TATCGTTCAC GCTGGTCGCA AAAAATATTC AGAAAGTGGC TAATGCGTAA GCCTGTATTA
CATCCTGTGG TTAGCACAAT TCCTGCAGCA GCTTCGCAGC AACTAGTAAT GCACTTAGAT
AAGAGCTTTT TGCATAGAGA TTACCGCAAA GAAACAATCG CCAATACTAT GGCCTTTGCC
AAGGGTAAGG TAGATACATT AACCCAGCTA AACGAACCCT ATACCCCTAC CGTGCAACGT
ATTTCGCTAG ATTACAAAGC CTATAGTGCT AATGTTGGTG TGTCGGCCAT TAGCTTGAAT
GAGTTTGCTA GCGATGAAGT ACAATATTTT CATATAGGGC CTTTTGGTCA GATGCGCGAA
CACGCCTATC AGCGCAGCCA GTTCGATTTT GTAAAAAACA ATGCCATACC ATTAATGCCG
CAGTTTGATG ATGAGGGCGC GCTCCACATA GGCTTAACTA ATTTAAACCC CGGTGAAAGC
TGCAGTTTAT TGTTTCAAGT GGCCGAGGGA AGTGGCGACC CAGATTTACC CCAACAGGTC
ATTCGCTGGA GTGTATTGTG CGATAACTAC TGGAAAGACT TATCCAGTGA AGAGTTAATT
GCCGATACGA CTAACCACCT ACTTACTAGC GGCATAATTA AATTTGTTAT TCCTTCGCAG
GCAACAACGC TAAATTCGCT ATTGCCCACA GGTAAAATAT GGCTGCGCGC CTCAGTGCAA
CAAAATGTAG AGGCCGTGTG TAAGCTTGTA AGTGTCAATG CCAATGCAAT ACAAGTAAGC
TTTATAAATA ACGATAACGC CCCCAGCCAC TTGGTCGAGC CCCTAGCAAG TGGAAGCATT
GCAAAGCTTA AAACCCCTGT TGCAGAAATT AAAAAGATTG AGCAGCCCTA TGCGTCTTTT
GGCGCTAAAC CAGCAGAAAC AACACAAGCA TTTAATACGC GAGTGGCCGA GCGCTTACGC
CACAAAAACC GAGCGGTCAC AAGCTGGGAT ATAGAACGCA TAGTGCTTGC GAGTAACCCG
AGTGTACATA AAGTAAAAGC CATTCCCCAC TCGCGCCCCA ACAACTGGAA AGCCCCTGGT
AATGTGTTGG TCGTGGTTGT CCCTAAGCTC AACAACCAAA ATGCGGTGAA CCCCTTACAA
CCTAAGGTAA GCGGCAATAC GCTTAGCAAA ATAAAGCAAC ACTTGCAGGC ACTTGGGCCA
ATGCAAGTGC AACACCATGT AGTAAACCCA ACCTATCAAC AAGTACAGAT GAGTTTGCAG
GTTAAATTTA AAGTAGGGTT TGAGTTTAAT TTTTACAGTA AGGCGTTGAA GCAAGCATTA
ATACGCTATT TGTCGCCATG GGCTTACGGC GAAGGTGATG ATATTGAGTT TGGTGGCAAA
CTATATAAAT CGGCGCTGCT CGATTTTATT GAAGAGCTAG ATTATGTCGA TTACCTAACA
GACGTAAAGT TATATACCTT TATCGATAGC AGCGAGACGA AGCAAGATGT GCAAGTTGTT
ACCGTTCAGT CGCCAGATAG TATTTTAGTA TCTGCTGCAG ATCACACTGT GCTGGAATAC
CAGCCGTAG
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| Protein sequence | MAGQDIVQNM IAALGQSQSQ RLPSALAEHY VDIDDSTSED VYVFIKKFSS HVNFYQNNPD
APSGDWQNFF TYSEGEAKKW LDAQGQAVPP HIGLLDTFIE LLREPKDLLN HFTARHLQFY
YRDILRFNPL PPVVDKAHVI VQLKKNTPAV ALTPQHQFSA GKDATGKERI YAPTDTTIIN
HSEVSDLSSI YSNAYSLGKI HLAPIANSAD GVGGDLDKES PKWSAFGNSD MPLAEIGFAI
ASPLLYLQEG VRTITADLTL SQISANNIAN ANLSGAFNVY LTAPKQWLGP ISVTPSLLGS
VLRLQFSLSA EQEAVVNYSA AIHGHSFHAS APVMQVLLNN DKQNIGPATF NNLIIEAAKI
SVDVSGVTTL KLENDTGSLN PKKAFQPFSA QPERGSRFII GSDEVFSKRL QEVKINLLWQ
VPATNLAAYY ATYKQPIANN SYFTAGAALQ DGEGRVLSGS ALNLFNATSA ASEQSITLSV
SGSAASSTST NSKQAQALFR YRSRWSQKIF RKWLMRKPVL HPVVSTIPAA ASQQLVMHLD
KSFLHRDYRK ETIANTMAFA KGKVDTLTQL NEPYTPTVQR ISLDYKAYSA NVGVSAISLN
EFASDEVQYF HIGPFGQMRE HAYQRSQFDF VKNNAIPLMP QFDDEGALHI GLTNLNPGES
CSLLFQVAEG SGDPDLPQQV IRWSVLCDNY WKDLSSEELI ADTTNHLLTS GIIKFVIPSQ
ATTLNSLLPT GKIWLRASVQ QNVEAVCKLV SVNANAIQVS FINNDNAPSH LVEPLASGSI
AKLKTPVAEI KKIEQPYASF GAKPAETTQA FNTRVAERLR HKNRAVTSWD IERIVLASNP
SVHKVKAIPH SRPNNWKAPG NVLVVVVPKL NNQNAVNPLQ PKVSGNTLSK IKQHLQALGP
MQVQHHVVNP TYQQVQMSLQ VKFKVGFEFN FYSKALKQAL IRYLSPWAYG EGDDIEFGGK
LYKSALLDFI EELDYVDYLT DVKLYTFIDS SETKQDVQVV TVQSPDSILV SAADHTVLEY
QP
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