| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1030 |
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| Symbol | |
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| ID | 3967784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1318376 |
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| End bp | 1319278 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637920097 |
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| Product | GGDEF |
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| Protein accession | YP_526504 |
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| Protein GI | 90020677 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAT ATACCTCGCC TTCTGACCTT GGCGGGAACT GTGCCCCCTT GCCTAACGAA
ACAGCACCCT CCCCCCGCAA TAACGCAGTG CTAGACCAGC TACTGCGGCG CGGCGATGTA
TGGCGCGGGC ATTCGGCTGC GTTTAATCAC AAAAGCACGC TCGCCACGGG GCACAGCGCA
CTAGACCCGC TGCTACTAGG CAATGGCTGG CCACTTAAAA GCCTTATAGA AGCTGCACTT
CCACTGGGTA AAAAAGCCCC AAACAGCAGC CTAGTGCCCG CTGCATGCTG GTTTTTACTT
GGCCCCAGTC TGCGAGCACA ACTTACTAAA AGCGATGGCT ACGTGCTGCT GCTTAATCCA
CCGGCTATAC CTTTTGCCCA AGGGCTAATA CAACAGGGCA TACCACTAAA CCGCCTGTTA
ATTGTAAACA CCGAAAATAA ACAGGATTTC GTCGCCGCGT TTACCGAGCT TAGCCAAGCA
ACTTACTGCC ATGCCGTAAT CGCCTGGCAA CCCAAACAGG CCTTAAGCTA TACCGAGTTA
CGCAAATGCC AATTAGCCTG CGATAACGGC CAAGCACTCA ATATTTTATT TAGAACTAAT
CTACTGCAAA GTAGCCCTGC GCCACTTAGG CTGGCGCTAA ACCTGCAACA ACACACCTTA
AATGTGCAGG TTATTAAACA GCGTGGCGAT TTTAAACAAG CCACCGCAGA GCTTGCCCTA
CCGGCAGACT GGCAAAGCCT TGCACCTTAT AAGTATTTAT TACCCAGCTC GCAATCACAG
CAACATCAAA ACGCTAATTT TAAAACCGCC GCCAACTATT ATTTCGGCGT GCTTTCTGGT
GCACCGCTAG CACCCAACAA CCTAGTGCCT CTCGCTAACT TCACCACTAA AAAAAGGCGC
TAA
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| Protein sequence | MPKYTSPSDL GGNCAPLPNE TAPSPRNNAV LDQLLRRGDV WRGHSAAFNH KSTLATGHSA
LDPLLLGNGW PLKSLIEAAL PLGKKAPNSS LVPAACWFLL GPSLRAQLTK SDGYVLLLNP
PAIPFAQGLI QQGIPLNRLL IVNTENKQDF VAAFTELSQA TYCHAVIAWQ PKQALSYTEL
RKCQLACDNG QALNILFRTN LLQSSPAPLR LALNLQQHTL NVQVIKQRGD FKQATAELAL
PADWQSLAPY KYLLPSSQSQ QHQNANFKTA ANYYFGVLSG APLAPNNLVP LANFTTKKRR
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