Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1020 |
Symbol | |
ID | 3967774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1303494 |
End bp | 1305263 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637920087 |
Product | glutathione-regulated potassium-efflux system protein |
Protein accession | YP_526494 |
Protein GI | 90020667 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCACA GTACAATATT TAACGTTCTC GCGTATTTGG GCGCGGCAGT GGTTGCCGTA CCTCTTTTCC GCAAACTGGG CCTAGGGGCT ATTCTTGGCT ACCTGTTTGC CGGCGCCGTT ATAGGCCCGC AGGGTTTTCA GTTTATCGAC CACCCCGAGT CGGCATTACA TTTCGCCGAG TTTGGCGTCG TCATGCTGCT ATTTCTTATT GGCTTAGAGC TAAACCCCGA AAAACTATGG AACATGCGTG TGCAAATTGG CTTGCTAGGT GGCGGTCAAT TATTAATTAG CGCGTTAATA ATAGCGGTTA GCCTAGTAGT GGGTATGCAG TGGGGCTGGC ACCTTGCCAT TATTACCGGT TTAACGCTTG GCTTGTCTTC CACCGCTTTT GCCGTACAGC TTATGGATGA ACAAGGGATT ATGGGTACCG CCTTGGGCCG CAAGGGCTTT TCTATATTAT TGCTGCAAGA TATGGCAGTT ATTCCACTGT TATTACTCGT AAGCGCATGG GCACCAACTA GCATTGAGTC AACCAGCGGC CACGCCCTAC CTTGGTGGTC GGGGTTATGT GCCGTTATTG CCGTGTTGCT TATTGGCCGC TTCGCCCTCG GCCCCATTCT TACGTTAGTA GCCCGTTACG GCAGTAAAGA GGTGCTTACC GCAGGTTCGC TGCTAATCGT ATTGGGCACC GCGGTACTTA TGCAGTATGT GAATTTATCT ATGGGAATGG GCGCCTTCTT AGCGGGCATT ATTTTAGCTA ACTCTAGTTT TCGCCATCAG CTAGAGGCAG ATATAGAACC GTTTAAAGGC TTGCTACTAG GCTTGTTTTT TATTGCTGTA GGCATGAGCC TAGACCTGCA ACTTTTACTA AAAGAACCAC TCGTTATTTT AGGTTTAGCC CTAGCACTTA TGTTGGCCAA AGCCACCGTT ATTATGCTGC TAACCCAGCT GCGCGCCTGC ACATGGAAAG AAGGCTTTTT ACTTGGCTTA ATGCTGTCGC AGGGCGGTGA ATTCGCATTC GTTGTAATGA CCAAAGCCGT TGGCCTTAAC GTTATAGATC AAAGCCTTGC AAACTACGTG GTTATGGTGG TGGGCATTTC AATGGCACTC ACCGCCCCAC TGGTTATGCT ATTTAAGCGT TTTATTCACA AACCAATACC TGCCAACACC AATTACGATG CCGCCACCGG TGAAGAACCA GAAGTTGTGA TTGCAGGGTT TGGTCGTTTC GGCCAAATAG TGGGGCGCAT ACTGGTAGCC AACAACATAC ACTTTACCGC ACTAGACAAA GACCCAACCC ACGTTGATTT TGTTAAACAA TTCGGTAATA AAATATTTTT TGGCGATGCT GCACGCATGG ATCTACTGCG CGCAGCGGGT ATTGATCACG CACGAGTACT TATTATTGCC GTAGACGATA TGGAAGATGC CACACGTATA GCACAACAGG TGCGCCACGA ATTTCCCAAA CTAAAAATTA TTGCGCGAGC TCACAACCGT ATGCACAACT ATCAACTCGT TGCTGCAGGC TGTAATGAAA TAATTCGCGA AACATTCGAA AGCAGCTTAC ACGCCGCGCG CAGCACGCTT GTGGCCCTAG GTGTTAATGA CGGCCAAGCA ATGTTCAAAG TAGAACTATT TCGCATGCAC GACGAAGAGC TTATTCAACG CGCGGCCAAA CACAGAGATG ACATGCCAGA ATTACTAAAA ATTGCACAGG AAGGCCGTAA AGAATTAGAG CGGCTATTCG AACAAGATAA GCACAATTAA
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Protein sequence | MDHSTIFNVL AYLGAAVVAV PLFRKLGLGA ILGYLFAGAV IGPQGFQFID HPESALHFAE FGVVMLLFLI GLELNPEKLW NMRVQIGLLG GGQLLISALI IAVSLVVGMQ WGWHLAIITG LTLGLSSTAF AVQLMDEQGI MGTALGRKGF SILLLQDMAV IPLLLLVSAW APTSIESTSG HALPWWSGLC AVIAVLLIGR FALGPILTLV ARYGSKEVLT AGSLLIVLGT AVLMQYVNLS MGMGAFLAGI ILANSSFRHQ LEADIEPFKG LLLGLFFIAV GMSLDLQLLL KEPLVILGLA LALMLAKATV IMLLTQLRAC TWKEGFLLGL MLSQGGEFAF VVMTKAVGLN VIDQSLANYV VMVVGISMAL TAPLVMLFKR FIHKPIPANT NYDAATGEEP EVVIAGFGRF GQIVGRILVA NNIHFTALDK DPTHVDFVKQ FGNKIFFGDA ARMDLLRAAG IDHARVLIIA VDDMEDATRI AQQVRHEFPK LKIIARAHNR MHNYQLVAAG CNEIIRETFE SSLHAARSTL VALGVNDGQA MFKVELFRMH DEELIQRAAK HRDDMPELLK IAQEGRKELE RLFEQDKHN
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