Gene Sde_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1020 
Symbol 
ID3967774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1303494 
End bp1305263 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content48% 
IMG OID637920087 
Productglutathione-regulated potassium-efflux system protein 
Protein accessionYP_526494 
Protein GI90020667 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACA GTACAATATT TAACGTTCTC GCGTATTTGG GCGCGGCAGT GGTTGCCGTA 
CCTCTTTTCC GCAAACTGGG CCTAGGGGCT ATTCTTGGCT ACCTGTTTGC CGGCGCCGTT
ATAGGCCCGC AGGGTTTTCA GTTTATCGAC CACCCCGAGT CGGCATTACA TTTCGCCGAG
TTTGGCGTCG TCATGCTGCT ATTTCTTATT GGCTTAGAGC TAAACCCCGA AAAACTATGG
AACATGCGTG TGCAAATTGG CTTGCTAGGT GGCGGTCAAT TATTAATTAG CGCGTTAATA
ATAGCGGTTA GCCTAGTAGT GGGTATGCAG TGGGGCTGGC ACCTTGCCAT TATTACCGGT
TTAACGCTTG GCTTGTCTTC CACCGCTTTT GCCGTACAGC TTATGGATGA ACAAGGGATT
ATGGGTACCG CCTTGGGCCG CAAGGGCTTT TCTATATTAT TGCTGCAAGA TATGGCAGTT
ATTCCACTGT TATTACTCGT AAGCGCATGG GCACCAACTA GCATTGAGTC AACCAGCGGC
CACGCCCTAC CTTGGTGGTC GGGGTTATGT GCCGTTATTG CCGTGTTGCT TATTGGCCGC
TTCGCCCTCG GCCCCATTCT TACGTTAGTA GCCCGTTACG GCAGTAAAGA GGTGCTTACC
GCAGGTTCGC TGCTAATCGT ATTGGGCACC GCGGTACTTA TGCAGTATGT GAATTTATCT
ATGGGAATGG GCGCCTTCTT AGCGGGCATT ATTTTAGCTA ACTCTAGTTT TCGCCATCAG
CTAGAGGCAG ATATAGAACC GTTTAAAGGC TTGCTACTAG GCTTGTTTTT TATTGCTGTA
GGCATGAGCC TAGACCTGCA ACTTTTACTA AAAGAACCAC TCGTTATTTT AGGTTTAGCC
CTAGCACTTA TGTTGGCCAA AGCCACCGTT ATTATGCTGC TAACCCAGCT GCGCGCCTGC
ACATGGAAAG AAGGCTTTTT ACTTGGCTTA ATGCTGTCGC AGGGCGGTGA ATTCGCATTC
GTTGTAATGA CCAAAGCCGT TGGCCTTAAC GTTATAGATC AAAGCCTTGC AAACTACGTG
GTTATGGTGG TGGGCATTTC AATGGCACTC ACCGCCCCAC TGGTTATGCT ATTTAAGCGT
TTTATTCACA AACCAATACC TGCCAACACC AATTACGATG CCGCCACCGG TGAAGAACCA
GAAGTTGTGA TTGCAGGGTT TGGTCGTTTC GGCCAAATAG TGGGGCGCAT ACTGGTAGCC
AACAACATAC ACTTTACCGC ACTAGACAAA GACCCAACCC ACGTTGATTT TGTTAAACAA
TTCGGTAATA AAATATTTTT TGGCGATGCT GCACGCATGG ATCTACTGCG CGCAGCGGGT
ATTGATCACG CACGAGTACT TATTATTGCC GTAGACGATA TGGAAGATGC CACACGTATA
GCACAACAGG TGCGCCACGA ATTTCCCAAA CTAAAAATTA TTGCGCGAGC TCACAACCGT
ATGCACAACT ATCAACTCGT TGCTGCAGGC TGTAATGAAA TAATTCGCGA AACATTCGAA
AGCAGCTTAC ACGCCGCGCG CAGCACGCTT GTGGCCCTAG GTGTTAATGA CGGCCAAGCA
ATGTTCAAAG TAGAACTATT TCGCATGCAC GACGAAGAGC TTATTCAACG CGCGGCCAAA
CACAGAGATG ACATGCCAGA ATTACTAAAA ATTGCACAGG AAGGCCGTAA AGAATTAGAG
CGGCTATTCG AACAAGATAA GCACAATTAA
 
Protein sequence
MDHSTIFNVL AYLGAAVVAV PLFRKLGLGA ILGYLFAGAV IGPQGFQFID HPESALHFAE 
FGVVMLLFLI GLELNPEKLW NMRVQIGLLG GGQLLISALI IAVSLVVGMQ WGWHLAIITG
LTLGLSSTAF AVQLMDEQGI MGTALGRKGF SILLLQDMAV IPLLLLVSAW APTSIESTSG
HALPWWSGLC AVIAVLLIGR FALGPILTLV ARYGSKEVLT AGSLLIVLGT AVLMQYVNLS
MGMGAFLAGI ILANSSFRHQ LEADIEPFKG LLLGLFFIAV GMSLDLQLLL KEPLVILGLA
LALMLAKATV IMLLTQLRAC TWKEGFLLGL MLSQGGEFAF VVMTKAVGLN VIDQSLANYV
VMVVGISMAL TAPLVMLFKR FIHKPIPANT NYDAATGEEP EVVIAGFGRF GQIVGRILVA
NNIHFTALDK DPTHVDFVKQ FGNKIFFGDA ARMDLLRAAG IDHARVLIIA VDDMEDATRI
AQQVRHEFPK LKIIARAHNR MHNYQLVAAG CNEIIRETFE SSLHAARSTL VALGVNDGQA
MFKVELFRMH DEELIQRAAK HRDDMPELLK IAQEGRKELE RLFEQDKHN