| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0877 |
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| Symbol | |
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| ID | 3968811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1135769 |
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| End bp | 1136614 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919939 |
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| Product | signaling modulator of AmpD, AmpE |
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| Protein accession | YP_526351 |
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| Protein GI | 90020524 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0027178 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0245194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAC TCACACTTAT CATAGCGATT GCCTTTGTAC AGGTATGGGG TGCAGAAAAC
CCCTTGCATA AAGATGGCTG GTTTGTGCAA TGGTGCGATG GCTTGCAGGC CCGCTTAAAA
GCCAGTGCAA TTCGGGAATA CACTTGGTTG GTGGCAGTAC TTGTGCCGGT TTTATGTGTC
TGGCTACTCG CCGAAGCGGT GGGCGCCGTG TCTGCTTGGT TGTTGCTACC AATAAGTGTG
GTGGTAATGC TTTACAGCTT GGGGCGGGGT GAATTTACCA ATATTGTGTC TGAATACACC
AAGGCCTGTT ACGTTGAAGA TTGGCCTTCG GCGATGGAAA GGGCGCAAAG GTTAGGGGTG
CATACCGACG GAGTAGACGA AGGCGATTGG TCCGCATTGC ACGAACAGGT GTTAACCGAG
GCCGGTTACC GCGGTTTTGA ACGCAGCTTT GTAATAATTT TTTGGTTTTT AATTACCGGC
CCTGTGGTGG CTTTGCTCTA CCGCTTATTA TTTATTTATT GCCAGCAGCG CCCTAGCGAA
GACCTACCCG CAAAGTGTTT GTGGGCAATG GAATGGCCAG TTACCCGCTT ATTGGGGTTA
AGTTTTGCAT TTACGGGCAA CTTTGTAGGG TGTTACAACC GATTAAAAGA GTGTTTGATT
TGCTTCAAGC GGTCATCGCA GGAGGTTTTA ACCCAGTCAA TTCTTGGGGC TTTGTCAGTA
GATGAAAACC TTACACAATC CTGCGAGGTT ACCCGAAAAG AATTGGATTT ACTGTCTAAG
TTGTATAAAC GTACACTGTG GTTCTGGTTG GCGAGTGCAG CATTAATCAT TATTGTGGTG
CACTAG
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| Protein sequence | MDLLTLIIAI AFVQVWGAEN PLHKDGWFVQ WCDGLQARLK ASAIREYTWL VAVLVPVLCV
WLLAEAVGAV SAWLLLPISV VVMLYSLGRG EFTNIVSEYT KACYVEDWPS AMERAQRLGV
HTDGVDEGDW SALHEQVLTE AGYRGFERSF VIIFWFLITG PVVALLYRLL FIYCQQRPSE
DLPAKCLWAM EWPVTRLLGL SFAFTGNFVG CYNRLKECLI CFKRSSQEVL TQSILGALSV
DENLTQSCEV TRKELDLLSK LYKRTLWFWL ASAALIIIVV H
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