| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0872 |
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| Symbol | |
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| ID | 3968806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1128376 |
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| End bp | 1129332 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637919934 |
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| Product | regulatory protein, LacI |
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| Protein accession | YP_526346 |
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| Protein GI | 90020519 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTC CACCTTTAAA CTTTGCGCTC CTGGGCGCGG CCGGCTACAT TGCCCCTAGA
CACATGGAGG CTATCAGAGC TACAGGAAAC AAGCTTATCG CGGCCCTCGA CCCGAGCGAT
TCGGTAGGCA TTATCGATAG CTATTTCCCT GACGCGCACT TTTTCACTGA ATTTGAACGC
TTCGATAGAC ACATAGAAAA AATGCGACGT AAAGATAAAA GCAATAGTAT CGATTACGTT
AGCATATGCT CCCCCAACTA CCTTCATGAC GCCCATATTC GCTTTGCGTT CCGCTCTGGA
GCGGCAGCCA TCTGTGAAAA GCCGCTCGTT TTAAACCCAT GGAACCTAGA TGGACTACAA
GACATTGAGC AAGCTACTGG ACGCAAAGCA TACAATATAT TGCAGCTTCG GCATCACCCA
ACAATAATGG AGTTGCACCA AAAGCACGCC AACAGCGAGA AACATTTAAA CATTGACCTT
ACATATATTA CCTCTCGCGG CAATTGGTAT CTTCATTCTT GGAAAGGCGA CGACTCCAAG
TCTGGGGGAA TAGCAACTAA CATAGGGGTA CACTTTTTTG ACATGCTAGG CTGGATCCTC
GGGAAGCACA TATCAACAGC CGTATACTTA AAAACACCAA CAAAAGTTTC AGGAACAACC
CAATTTGCCA AAGGAACTGT GAGGTGGTTC TTAAGTATTG ACTCAAATGA TCTCCCCAAA
GTAGCTCTAG ATAAAGAACA ACGAACTTTC AGAAGTATTA AAATAGATAA TCAAGAACTA
GAGTTCTCAG GCGGATTTAC AGACTTACAT ACCACCAGCT ATAAAGAGAT TTTGGCTGGC
AACGGCTTCG GGCTTGAAGA CGCAAGACAG TGTATCGAGA TAGTCTACGG TATTAGAGAA
GCCAAAATAT CCGCACTTTC CGGAGACTAC CACCCCTATC TAAAAGGCTC CCAATGA
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| Protein sequence | MKTPPLNFAL LGAAGYIAPR HMEAIRATGN KLIAALDPSD SVGIIDSYFP DAHFFTEFER
FDRHIEKMRR KDKSNSIDYV SICSPNYLHD AHIRFAFRSG AAAICEKPLV LNPWNLDGLQ
DIEQATGRKA YNILQLRHHP TIMELHQKHA NSEKHLNIDL TYITSRGNWY LHSWKGDDSK
SGGIATNIGV HFFDMLGWIL GKHISTAVYL KTPTKVSGTT QFAKGTVRWF LSIDSNDLPK
VALDKEQRTF RSIKIDNQEL EFSGGFTDLH TTSYKEILAG NGFGLEDARQ CIEIVYGIRE
AKISALSGDY HPYLKGSQ
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