| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0838 |
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| Symbol | |
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| ID | 3965794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1088561 |
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| End bp | 1090606 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637919900 |
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| Product | hypothetical protein |
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| Protein accession | YP_526312 |
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| Protein GI | 90020485 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1626] Neutral trehalase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.179051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCTGTT GGCGAAGTGT TGTTTTAAAA AATAATATAT TGAATCGTTT GCTTGTGTGT
TTTTTTGGCT GCGTTGTTTT TATAACTGTG CAAGCTAATC CCGCTTCTCC AAATATTAAA
AATATCCCTC AGGTTTACCT CGAAGAACAT AAAGGTTGGC AAGACCTTTA CTATCGTACT
TTTGAAATTG CATTTGAAAA AATACAGCGC GGAACGCCGC AAAATGGTTT TGTGGATTTT
TATATGGACG AAGCCTTTAA CCCTAATATT TTTCAGTGGG ATACAAGCTT TATTATGATG
TTTGCTCGTT ATGGTAATAA AGAATTGCCG GGCATTGTAT CGCTGGAAAA TTTTTACCGT
TATCAACATG CCGATGGTTG GATTGGTCGC GAGCTGCGGG AAAAAGATGG CTCGTCCTAC
TGGCCTAAGA CAGGAAGTTT GGAGGCGAAT TGTTCTATTA ATCCGCCATT ATTTTCTTGG
GCCGAATGGC AAAGTTACGA AGTAAAAGGG GATGCAAGTA GGTTTGCCAA AAAAATAAAT
GGCAAATCTA TTTTTAATAT TCTGGTTGAT TATTACGATT GGATAAAAGC TAATCGACGC
TGGGATAACG GACTGTATTG GGCGACCAGC TATGCCAACG GTATGGATAG AAGCCCGCGC
TTAGGTACTA AACATGTGTG CGAACACGCG GATGGAAGTT GGATAGATAT AACCGCGCAG
CAAGCGTTAA ACGCCTACTA CCTAGCTAAA ATGGCGGAGG TGATTGGAGA GCAAAAAGCG
CAGCAGCGTT TTGAGCAAGA GCATGCCGAG CTTGCGCAAT TAATTAACGC TATTTTGTGG
GATGAGCAAG ACGGTATTTA TTATGATTTG GATAAAAAAG GTAACTTTTA TAAGGTTAAA
ACGCCAGCTT CCTTTTGGCC GTTTATAGCG CGGGTAACCT CTGATAAACA AGAATTGCGC
ATGTTAAACG AGCATATTCT TAACCCTCAA CGCTTTTGGA CCGAGCACCA TTTGCCCACC
GTTGCTAAAG ATGAACAAAC CTACATGAAA GATGGCGGTT ATTGGGACGG AGCCGTTTGG
GCGCCCACAA CGTATCAAAC CATTAAGGGG TTAGAGGTGA AGGGGTATCG CGAGGCTGCG
CGTCGCATTG CGATTAACCA TATCGAGCAT ATTTATTGGG TATATCGCAA AACAAATACT
CTGTTTGAAA ATTACAGGCC AGAGGAAGTT GCCGAAGGTG TGCACGCACG GGCCGACTTT
GTGGGGTGGA CTGGTGTTGG CCCAATTGCA GCGCTTATCG AAAACGTTAT GGGTATTCAA
GTTAACGGTG CCAATGATAG TGTGCATTGG GATTTAGCCT TGGCAGAAAA ACACGGCATT
AAAAATTTAC ATTTTGGCGA TAATCGCATT GATCTAGAAG TGGATGACCG TCTAACGCCA
GATTCGGGCG CACGTGTTCG AGTTAAAACA AATAGCCCGT TTACCTTGTT GGTGAGCATT
GCTGGGGTTG AATATACGCA GGCCGTTGCA AAGGGTGAGC ATGAATTTAC GTTTGCCAAT
TTTGAGCAGG GCTTGTCGTC GCTAACTTTA ATGCACGAAG GGTTATTGGG CGTGGATGTT
GCCGGTGGCG ATGCCGTGGC GCGATACCAA ATGTTTACTG TTCCCCAGTC GCAAGCGCTT
GCGGGTGTGG ATGTAAAAAT ACAGCTGCAT GGTAATGGCG AGGCTTCTCC TTTGCTTGCT
AAGTTGTATC GAGTGGAAAA CGGCGTGCCT GTTGGAGAAG CTCTTGCGCA GGCTCTTGTG
CCCGCCGAGA CCGTCGATAG CTTCTACTCT GTGGTGCACG TTCCTTTGCA GTATGAGCGC
TTGAGTGCGC AGCAGCCCTA TGCGATTGCG TTGTCGCAAC AAGATGATAG CGGCAAGGGG
TATTATCAGT GGTTGGCAGG CGGCAATGTT TATGCGGCTT TTGTGTCTGG GCGTAAACAA
GCTGGGCAGT GGTTGGTGGA TAAAAACGCT AAAAATGCTT GGCTCAAGCT TTATCTTCGT
CCCTAG
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| Protein sequence | MFCWRSVVLK NNILNRLLVC FFGCVVFITV QANPASPNIK NIPQVYLEEH KGWQDLYYRT
FEIAFEKIQR GTPQNGFVDF YMDEAFNPNI FQWDTSFIMM FARYGNKELP GIVSLENFYR
YQHADGWIGR ELREKDGSSY WPKTGSLEAN CSINPPLFSW AEWQSYEVKG DASRFAKKIN
GKSIFNILVD YYDWIKANRR WDNGLYWATS YANGMDRSPR LGTKHVCEHA DGSWIDITAQ
QALNAYYLAK MAEVIGEQKA QQRFEQEHAE LAQLINAILW DEQDGIYYDL DKKGNFYKVK
TPASFWPFIA RVTSDKQELR MLNEHILNPQ RFWTEHHLPT VAKDEQTYMK DGGYWDGAVW
APTTYQTIKG LEVKGYREAA RRIAINHIEH IYWVYRKTNT LFENYRPEEV AEGVHARADF
VGWTGVGPIA ALIENVMGIQ VNGANDSVHW DLALAEKHGI KNLHFGDNRI DLEVDDRLTP
DSGARVRVKT NSPFTLLVSI AGVEYTQAVA KGEHEFTFAN FEQGLSSLTL MHEGLLGVDV
AGGDAVARYQ MFTVPQSQAL AGVDVKIQLH GNGEASPLLA KLYRVENGVP VGEALAQALV
PAETVDSFYS VVHVPLQYER LSAQQPYAIA LSQQDDSGKG YYQWLAGGNV YAAFVSGRKQ
AGQWLVDKNA KNAWLKLYLR P
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