| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0829 |
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| Symbol | |
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| ID | 3965785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1079794 |
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| End bp | 1080645 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637919891 |
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| Product | putative phosphomethylpyrimidine kinase |
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| Protein accession | YP_526303 |
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| Protein GI | 90020476 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAGT ATTCAACTAG CGCCAATCCG CCCGTAATAC TTACGTTTTC TACCCTAGAC
CCATCCGGTT GCGGGGGCAT TCAAGCCGAT ATAGAAACCG CCATTAGCTT AGGCTGCCAC
TGCGCCCCCG TGGCAACATC TATGTGTACA TCTGGGTTTT CCGATGAGCT CGATGTGCTC
CCCGTTGAAG CGCCACTGCT TATTGAACAG GCGCGCTCCA TATTGGAAAA CATGGATGTG
AAAGCCATTA AAATAGGCTA CTTAGGCTCG GTAGCAAACG CCGAAGCCAT TCACACCATT
ATTCGCGACT ACCCCGATAT TCCCGTTATT GCTCACCCTG CTCTTTGCCT ATGGCAACCC
GACGCGCCCG AGCAAGCTGG CTTAGACGAA GCCTTTAGCA CCTTAATTGC CCCGTTCGCC
GATATCGTTA ACCTTACACT CCATGAAGTA CGCACCCTTG TACCGCAGGC CGACACGGTG
GATGCCGCCG CTCACGCTTT TATCGCTGCC GATGCAGCCG GTGAAGTTTT TATTAGCGGC
ACAGGTAAAG AGCACCAGCA ATTTCAAAAC AGTTTGTACA ACGAGCGCGG TTTAGTTCGG
CATTACCGCT GGGAGCAAGA GCCGCCCTCC TGCCACGGCG CCAGCAGCAC ATTGGCATCT
GCAGTGGCGG CTTACCTCGC TCACGGCAGC AGCCTTACTC AGGCGATAGA ACAAGCGCAA
AACTTTACTT GGCAAGCGAT GCGCACTTCG CGCCAATTAG GGTTTGGCAA ACGCACTCCG
CACCGCTTAT ATTGGGCCGA CCCCAATATA GATAGCCCAG AAGAATGGCC CGCAGAGAAC
GCAAAACACT AA
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| Protein sequence | MMQYSTSANP PVILTFSTLD PSGCGGIQAD IETAISLGCH CAPVATSMCT SGFSDELDVL
PVEAPLLIEQ ARSILENMDV KAIKIGYLGS VANAEAIHTI IRDYPDIPVI AHPALCLWQP
DAPEQAGLDE AFSTLIAPFA DIVNLTLHEV RTLVPQADTV DAAAHAFIAA DAAGEVFISG
TGKEHQQFQN SLYNERGLVR HYRWEQEPPS CHGASSTLAS AVAAYLAHGS SLTQAIEQAQ
NFTWQAMRTS RQLGFGKRTP HRLYWADPNI DSPEEWPAEN AKH
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