| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0827 |
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| Symbol | |
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| ID | 3967725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1077818 |
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| End bp | 1079089 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637919889 |
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| Product | glutamate-1-semialdehyde aminotransferase |
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| Protein accession | YP_526301 |
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| Protein GI | 90020474 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
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| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.215136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAAG CATTTGAGAA CGCCCAGCAA TATATTCCAG GCGGAGTAAA TTCACCGGTA
CGCGCATTTA AAGCCGTGGG CGGCGAGCCA GTGTTTATTA AGCGCGCAAA AGGCGCCTAC
CTTTACGATA TAAACGATAA GCGCTATGTG GACTATGTGT TGTCTTGGGG GCCAATGATT
TTAGGTCACG CGGATGACGA CGTACTGGCC GCCGTAACAG AAAAACTACA ATACGGCTTA
AGCTTTGGCG CCCCTACCGA AATAGAAACC GAATTAGCCA AGAAAATCTG CAACATTATG
CCGGGCATGG ACAAGGTGCG CTTTGTTAGC TCTGGCACCG AAGCCACCAT GAGCGCCATT
CGCTTGGCCC GCGGTTATAC GGGCCGCGAT AAAATCATTA AATTTGAGGG CTGCTATCAC
GGCCATTCAG ATTCGCTTCT TATTAAAGCG GGCAGCGGCG CGCTCACTTT TGGCGTACCT
AGCTCGCCAG GTGTACCTGC CTGCTTAGCC GAACACACAG TGACGCTTAC CTACAACAAC
ATTGAACAAG TGAAACAAGC GTTTGCTGAA ATAGGTGACC AAATTGCCTG TGTAATTGTG
GAGCCCGTTG CCGGTAACAT GAACTGCATT CCACCTATTG CTGGCTTTTT AGAAACGCTG
CGCGAAGAGT GCACCAAGGC AGGCAGCCTA TTAATTTTAG ATGAAGTAAT GACCGGCTTT
CGCTTAGGTA TTACCGGCGC ACAGGGTTAC TACGGCGTGC AACCAGACAT TACCACCCTA
GGTAAAGTAA TGGGCGGCGG TATGCCTGTA GGGGCGTTTG GCGGCAGCAA AGAGGTGATG
GACTACATAG CACCAACAGG CCCCGTGTAC CAAGCAGGCA CCCTTTCGGG CAACCCTGTT
GCCATGGCGG CAGGCCTAGC CACCGTACAG AAATTAGAAA ACCCAGATTT CTACGCCCCA
CTTTTCGCAA AAACCAAAAC CCTATGCGAA GGTATTCAAA CCTTGGCGAA AGAAGCAGGC
ATTCCACTTA CCGGCAATTA CGTTGGCACC ATGTGGGGTT TATTTTTTAC AGAGGAAGAA
AAAGTAACCA ACTACCAACA GGTAATGGCT TGCGATATTC CACGCTTTAA TAAGTTTTTC
CACGGCTTAC TAGAAGAAGG CGTTTATATT GCACCCGCCT CTTACGAAGC AGGCTTCCTA
TCTGCCGCAC ACACAGACGC AGATATAGAC TTCACCCTGC AAGCCGCAAA AAATGTGTTT
GCACGTATTT AA
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| Protein sequence | MSQAFENAQQ YIPGGVNSPV RAFKAVGGEP VFIKRAKGAY LYDINDKRYV DYVLSWGPMI
LGHADDDVLA AVTEKLQYGL SFGAPTEIET ELAKKICNIM PGMDKVRFVS SGTEATMSAI
RLARGYTGRD KIIKFEGCYH GHSDSLLIKA GSGALTFGVP SSPGVPACLA EHTVTLTYNN
IEQVKQAFAE IGDQIACVIV EPVAGNMNCI PPIAGFLETL REECTKAGSL LILDEVMTGF
RLGITGAQGY YGVQPDITTL GKVMGGGMPV GAFGGSKEVM DYIAPTGPVY QAGTLSGNPV
AMAAGLATVQ KLENPDFYAP LFAKTKTLCE GIQTLAKEAG IPLTGNYVGT MWGLFFTEEE
KVTNYQQVMA CDIPRFNKFF HGLLEEGVYI APASYEAGFL SAAHTDADID FTLQAAKNVF
ARI
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