Gene Sde_0779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0779 
Symbol 
ID3965832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1006687 
End bp1008969 
Gene Length2283 bp 
Protein Length760 aa 
Translation table11 
GC content49% 
IMG OID637919841 
ProductAcetyl-CoA biotin carboxyl carrier 
Protein accessionYP_526253 
Protein GI90020426 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.150806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTGC TTTCTATAAA GCACGTTTTC AAAATAAATT GGCAGCAATT AATAGCTGCC 
GCTACATTAG CCGCGCTTGC GGGCACAGCG CACTCCGCTC CCTATGAGTG GAACTACCCC
GCACCCGTTA AAACACCAAG CGCTGCTAAC GATAACGGCA AGGTAGTAAT ATTTGATGTT
TCCCACGGCG GCACAGAAGG TAATGCCGAC TGGGTAATCG ATGGTGCTTT TTCTGATTTC
GCCGATGCTC TAGTAAATGC CGGCTACACC GTACACGAGT ACCGTGGTGA AGATAAAAAC
AACGACGGTA TTATTCAATT TGTAGATGAT TACACCAACC CATCTGCAGC AGCCAGTGCC
GCCAACGAAG CGGTAATTAC CAGCGCAGGC ATAAGCCACG CCGATGTACT GGTGTTAGCC
GAAAGTAACC GCCCGTTTAC GCAAGCGGAA TTAACGGTTT TAGAAAACTT TGTTGCTGCC
GGTAAAGGTA TTTTCTTTGT GGCAGATCAC TACAATGCAG ATCGCAACCT AAATAGTTGG
GATGCTACAG AAGTATTTAA TGGCTACAAC CGCTCAAACT TATCCCAGTT TAACGTAGGT
GGCGCATATG GTGATTTACG CAACACCGGC AGTGCAAATA TTGGCTGGTT GGCAGAAAAC
TTTGGTATTC GCTTTCGCTT TAACGCCGTT GATTGGAAGC CAGGCGCAAG CGGCATAGTA
AGTACCAGCC AAAGCGAAGG CATTACCAAC GGTGTAACAC CAGTCCTTAT GGCCGGTGGT
GCGACCTTAG CTATTACCGA TCCAACGCGG GCAAAAGGGT TGGTTTATTT TTCTGCTAGC
GATAACCCAG TTCGCTGGAA CCATGCAGTC GATTCTGGTT TGTATTTTGG TGGTATGGAT
GAAGGCCCGT ACGTAGCGAT CGCCAAATCC GGTATAGGTA AGGCTGCGTT TATTGGCGAT
TCCAGTCCTA TAGAAGATAT TACCCCGCGC TATCGCCGCC AAGATAACGG CAACACTAAA
ACCACTTACC CTGGTTGGAC GGATGCCGGC AACGCTGCGC AACTTTCTTT AAATATTATT
GATTGGCTTG CCACACCAGA AACCTATACC CATTTTAATA CCACTGCCCA CCCTGCAGGT
ATTGCCACGC CCAATCCAAT GGCCACGGAA GAATTAACCG ACCCAGATAA CGGCCAACCT
TGGAGCACGC CAAGCGGTGG TTACAACCCG TGGGACGACT CGACCTTCGC CAACGGTGCT
TACGGTGCTC AAAACCCTGT GGGTGGTGCA AGTTCTAGTA GCTCTTCAAG TTCATCTAGC
AGCTCTACGT CGTCTAGCTC TGGCGGTGCG CCCAGCGGCT CTGCAGTTTC TGTTGGCGAC
GCTTTAGCGC TTTCTGTGGG CACGCCGGTT ACGGTAACGG GTGTTGTTAC GCAGGCAATC
AATGGCGAGT ACGCATTAGA AATTGCCGAT GCGGCAAACA GTGCAAACAC CATTTTTATT
AAATTAGAAA GCCAATATCG CGCCGATTTT AGCCCGCAAA ACAACCCCGC CATTTTAGGT
GAAACGCTAC AAATAACAGG TAAGCGCGAC AACTACATGA GCGCACCAAG CGTTGAATAT
GTTACCGACA TGTTCGTTGT GCAAGCAGGC TTAAGTGTTA CAGATGCTCT TGCACTGCCA
AACGGTACAG ACGTAACCGT AGTGGGTGAA ATTACCCAAG CGGTGAACGG CGAGTACGCA
TTAGAGATGG CCGATTTAAA TAATGCCAGC AGCACCATTT TAGTAAAGCT AGAAAGCCAA
TACCGCGCCG ATTTTAGCCC GCAAAATAAC CCTGCAGTGC TAGGTGAAAC ATTGCTAGTG
ACAGGTACTC GCGACACCTA CACCAGCTTA CCAAGTATTG AGTACGTTAC CGATATGCAG
TTACAGGGTT CCAGCTCTGG CGGGAGTTCA GGCGGGAGTT CGGGTGGCGG TACAGCTTGC
GGTTCTGGTA ATGCCGTATC GGTTAGCACT GCTTATTCCG CTTCTATGGG TACGCCGCTA
GTCGTTATTG GTGAAGTGCA AAGTGGTATC AATAACCCCT ATGCCTTAGA GCTAGCAGAT
TTAAATTCTA CCTCTACTGT GTATGTAAAG CTGGAATCGG ATCAGCGCGC TTATTTTAGC
CCAGCGAATA ACCCAAGCAT ATTGGGCAAA GTAATAGAGG TAACAGGCAC GCGGGATTTG
TACATGAGCT ACCCAAGCTT GGAATCAGTT AGTCAGCTAG TAGAGCAAAG CAACTGTAAT
TAA
 
Protein sequence
MALLSIKHVF KINWQQLIAA ATLAALAGTA HSAPYEWNYP APVKTPSAAN DNGKVVIFDV 
SHGGTEGNAD WVIDGAFSDF ADALVNAGYT VHEYRGEDKN NDGIIQFVDD YTNPSAAASA
ANEAVITSAG ISHADVLVLA ESNRPFTQAE LTVLENFVAA GKGIFFVADH YNADRNLNSW
DATEVFNGYN RSNLSQFNVG GAYGDLRNTG SANIGWLAEN FGIRFRFNAV DWKPGASGIV
STSQSEGITN GVTPVLMAGG ATLAITDPTR AKGLVYFSAS DNPVRWNHAV DSGLYFGGMD
EGPYVAIAKS GIGKAAFIGD SSPIEDITPR YRRQDNGNTK TTYPGWTDAG NAAQLSLNII
DWLATPETYT HFNTTAHPAG IATPNPMATE ELTDPDNGQP WSTPSGGYNP WDDSTFANGA
YGAQNPVGGA SSSSSSSSSS SSTSSSSGGA PSGSAVSVGD ALALSVGTPV TVTGVVTQAI
NGEYALEIAD AANSANTIFI KLESQYRADF SPQNNPAILG ETLQITGKRD NYMSAPSVEY
VTDMFVVQAG LSVTDALALP NGTDVTVVGE ITQAVNGEYA LEMADLNNAS STILVKLESQ
YRADFSPQNN PAVLGETLLV TGTRDTYTSL PSIEYVTDMQ LQGSSSGGSS GGSSGGGTAC
GSGNAVSVST AYSASMGTPL VVIGEVQSGI NNPYALELAD LNSTSTVYVK LESDQRAYFS
PANNPSILGK VIEVTGTRDL YMSYPSLESV SQLVEQSNCN