Gene Sde_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0728 
Symbol 
ID3965288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp941175 
End bp942095 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content45% 
IMG OID637919790 
Producthypothetical protein 
Protein accessionYP_526202 
Protein GI90020375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTG CATTGGCATA CGCGTGCGTG GTTTTAATTT GGGCGACTAC GCCGCTAGGG 
ATAAATTGGA GCAACAGTAC ATTAAGCTTT GCGGCAGCGG TGGCGCTGCG TATGTGTTTA
GCGTTAGCTA TTTGTTGGCT GGCGCTTGTG GTTATGCGCG AGCGCTTAGT GCAGCAGCGC
TCCGATTGGA AAGCCTTTTT TGCCGGTGCT ATAGGTTTAT ACCCCAATAT GCTTTTGGTT
TATTGGTCTG CGCAATTTAT TCCCTCGGGG TTAATGGCCG TAATATTAGG TTTGTACCCG
TTTACTGCAG GTTTATTTAC GTATTTTATT TTAAAAGAGT GGGTGTTTAC GCCGCCGCGC
ATTGTTGCGT TGGCATTGGC GGTTACGGGC TTGGGCGTTA TTCACTATGA GCACCTAGCG
TTAGGCAGTG ATGCCATTTA CGGCATTATG GGCATGCTGG GCTCTACATT TTTATTTGGT
TTAAGCTCGG TGTGGTTGAA GGCCAGTGGT GCGGCGGTAG AGCCATTGCG GCAATCCACG
GGTACGTTGT TGTTATCTAC CCCATTTTTT ATTTTAAGTT GGGTGGTAAC AGGGGTGAAT
ATTCCTGCGG CAATAGATGT TAAATCTATT GTGGGGGTGA GTTATTTGGC GGTGGCAGGG
TCGGCAATTG GCGGCACACT TTTTTTCTAT GTGCTAAAAA AATGCTCTAT GAGTTCTGTT
TCGCTAATTA CCTTAATGAC CCCTATGATG GCGCTAACCA TTGGTATGTT ATTTAATAAT
GAGACAGTTA CCCAATTAGA ATTTATTGGC TGCATTATTA TTTTATTCTC GTTGGCTATT
TACCAAGGTG CATTGCGTGT TGTAGTAAAA CAAATTAATC GCCTTTTAGC TGTTGGTAAG
CAGCCAGTGC AGCTTCCCTA G
 
Protein sequence
MRVALAYACV VLIWATTPLG INWSNSTLSF AAAVALRMCL ALAICWLALV VMRERLVQQR 
SDWKAFFAGA IGLYPNMLLV YWSAQFIPSG LMAVILGLYP FTAGLFTYFI LKEWVFTPPR
IVALALAVTG LGVIHYEHLA LGSDAIYGIM GMLGSTFLFG LSSVWLKASG AAVEPLRQST
GTLLLSTPFF ILSWVVTGVN IPAAIDVKSI VGVSYLAVAG SAIGGTLFFY VLKKCSMSSV
SLITLMTPMM ALTIGMLFNN ETVTQLEFIG CIIILFSLAI YQGALRVVVK QINRLLAVGK
QPVQLP