Gene Sde_0725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0725 
Symbol 
ID3965285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp938217 
End bp938825 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content48% 
IMG OID637919787 
Producthypothetical protein 
Protein accessionYP_526199 
Protein GI90020372 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATATGT GCTTTATTCA AGCGCTCTTC ATCAAGCACC CAGCATTGGA GGCAAGCATG 
ATTCGCCACT ACTTTATTAG TGATGACCTA GACGACCTAA ACGCAGTAGA GCAAGAACTA
CTGGAGGCCG GTATAGACCC CGCACAGCTG CGCGTGCTTA GCGACCACAA CCAGAGCAAT
GCACACAAGG TAGATGAAGT GGATTCGCTA AGCCGACGAG ACATTATTCA TTCTGGCTTG
GTGGGTGGTG TAATTGGCTT GGGGGTAGCA GCCATTATTA TAGGCGTGGG GTATTACTCT
GGCGCAAGCT CGCTGGAAAC CTGGCTGCCG TTTATATTTC TTTCTATTGT TGTTGCGTGC
TTTTGTACTT GGGAAGGTGG CTTGTTTGGG ATTCAAGTTT CAAACATACA GTTTCGCCGG
TTCGAATCTC TTGTGCAGCA GGGTTACCAT GTGCTGCTGA TTGACATGAA AAAAGTACAG
GATGAAAACA TCCGTCAAAT TGTAGAAAAA CACCCCAAAC TACAAGACGC CGGCACCGGC
CAAGGCCGCC CCGACTGGGT GGTTTCGTCT CATAAAAATA TGAGTGCGTT TATAAAGGCG
ATGCCTTAG
 
Protein sequence
MYMCFIQALF IKHPALEASM IRHYFISDDL DDLNAVEQEL LEAGIDPAQL RVLSDHNQSN 
AHKVDEVDSL SRRDIIHSGL VGGVIGLGVA AIIIGVGYYS GASSLETWLP FIFLSIVVAC
FCTWEGGLFG IQVSNIQFRR FESLVQQGYH VLLIDMKKVQ DENIRQIVEK HPKLQDAGTG
QGRPDWVVSS HKNMSAFIKA MP