| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0704 |
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| Symbol | |
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| ID | 3966301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 913154 |
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| End bp | 915181 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637919765 |
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| Product | 16S rRNA dimethylase |
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| Protein accession | YP_526178 |
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| Protein GI | 90020351 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0625805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTACTC ATATTACCCG CACTTTACGC GGCTTTTTCT ACCATGCGTT AAAAACAGCA
GCAGCTTTAA TGGCTGTGTG TATATTTTCT CTTACTCATG CTCAAAGTAT GAATCACCCC
GGGGGCATGC ACTCCAAAGC CGATCTCGAT TTTATTAAGT CGAAAGTTCA ATCGGGTGAA
CAGCCTTGGA AAGGCGCTTT TGAACAGTTA AAAAACAGCG GCTACGGGAA ATTATCTTAC
AATTATGTGG CCTATAAGGA TGTGAAATGT GGCTCGTATA ACAACCCGAA TGTGGGTTGC
AATAATATGG TGAAAGACGG TATTGCTGCT TATACCTTGG CGCTGCGCTG GTACATCGAA
GGAGATGATG CTTACGCAGA TAAAGCGATA GAAATTATTG ATGCTTGGTC TGTAAAGTAC
CGCACAAACC AAGAGTCGAA TACACGCCTT GTTGTTTCTT GGGCTGCTCC TTGGTACGTG
AACGCGGCAG AAATTTTGCG CTATACCGAC GGTAGTGGGT GGACGATTAC TAACACCAAC
CAATTAAACG CAATGCTTAA CCGCTTTAAG AATTATATTT TTTGGGAGGA TCGTCCAAAC
AATAACTGGA TGATGTCTTC AGTTGAAGCG CGTTTAGCGA TTGCTGTTTT TCAAGACGAT
ACAACCGCTT TTGGCGATGC TATCGATAAG TGGCGTTTAC GAATTAAAAC GTATTTGTAT
CAATCTTCCG ATGGTTCTGT GCCTATTGTT AGTCCAAACG TTACGCCCGG CCAATCGTCG
TCGATATGGA AGCAGGGTAC TAACACGATC TATGTTAATG GTATGGGAAT GGAAACCTGT
CGCGACTTCA ACCATATGAA GTTGGGTTTT GATTCACTGA TGAACGGAGC AGAAATAGCT
TGGACTCAAG GTGTTGATCT GTTTGCTTCG GAAAGTAAGC GCATTAGAGA TTTCTTGGAG
TTACACGGCC ATTGGGCTAC AGGGTCGAAG AGCATTCCTA GCAACGTATG TGATGGCTCG
ATAGACTGGA AAGGAACCAA GGAAAATGCA CAGCAAGCAT TCGAGATTGC TTACAATCAC
TTGCATGACC GCTTAGGTAT TAGCCTGCCT GAAACTAAGC AAATGATAGA CAATAAGCGC
CCGAATAACG CAAATCATTG GGTGTCTAAA TGGGAAACAC TCGCTTATGC TGATCGCCCG
TTTAACCTTG ATGATGGTGC AGGCCCAACG GTTTCTTTTG ATGAGCCTAA CGGGAATATC
ACCGTTAGCC CTGGTTACGC GCAAAGTGTA ATTGTAGAAG CGACGGACTC CGACGGCATT
GCACATGTTG TGCTTTTTAT TGACGGTAGT GAGGTGCGTA AAGAGACTAA GTATCCGTAT
ACTTGGGGAA TTACCGAGTC GGATACGCCG AATGAAATTA ACAACTTACC TGCCGGTACT
CACACCATTA AAGCTGTCGC GACAGATAAT ACTGGTAAAA CCGGTGAGGC AACATTTAAG
TTAACGGTAA CATCGCCTTC GGATGGCTTA GACCAGTGTG ATACCACCAG TCAGTGTATG
GCTCAGTACA GCTTTTTTAG CGGTGCTATG GATTGCTCTA ATAGTCAGGC GAGCGACAGT
GTGTGCATGT GTGGCTCAGC TCGTTGTGAC TCTTTAAGTG GTTCTTCAAG TTCTAGCACC
TCGTCAAGCA CCGGTAGTTC ATCTAGCTCT AGCAGCTCTT CTAGTTCCAG TTCTGGTAGC
GCAGCGGGTT GCAACGGTAC GTTAAATGTC GCTATGAGCG AGAGAGTAGA GGTAAATCTT
AATAGTACAA ACTGTGTAAA ATTTGCGAGC ACATTGTCGG GTGAAACGCT TCAGGTTTGG
GATAGCGACA CACAGTCGTG CGACTTTAGA GGATCTGTTG TTTCACAGGA TGGTGCGGGG
AATTTAAATA TTTCCGCAAA CTACCACTCC TCCAGTTCGT TTTCGGGTAA AACAATCAAG
TTTGCACCGA GCAATGGCTG TAAATATGTG CAAGTAAAGT ACTACTAG
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| Protein sequence | MTTHITRTLR GFFYHALKTA AALMAVCIFS LTHAQSMNHP GGMHSKADLD FIKSKVQSGE
QPWKGAFEQL KNSGYGKLSY NYVAYKDVKC GSYNNPNVGC NNMVKDGIAA YTLALRWYIE
GDDAYADKAI EIIDAWSVKY RTNQESNTRL VVSWAAPWYV NAAEILRYTD GSGWTITNTN
QLNAMLNRFK NYIFWEDRPN NNWMMSSVEA RLAIAVFQDD TTAFGDAIDK WRLRIKTYLY
QSSDGSVPIV SPNVTPGQSS SIWKQGTNTI YVNGMGMETC RDFNHMKLGF DSLMNGAEIA
WTQGVDLFAS ESKRIRDFLE LHGHWATGSK SIPSNVCDGS IDWKGTKENA QQAFEIAYNH
LHDRLGISLP ETKQMIDNKR PNNANHWVSK WETLAYADRP FNLDDGAGPT VSFDEPNGNI
TVSPGYAQSV IVEATDSDGI AHVVLFIDGS EVRKETKYPY TWGITESDTP NEINNLPAGT
HTIKAVATDN TGKTGEATFK LTVTSPSDGL DQCDTTSQCM AQYSFFSGAM DCSNSQASDS
VCMCGSARCD SLSGSSSSST SSSTGSSSSS SSSSSSSSGS AAGCNGTLNV AMSERVEVNL
NSTNCVKFAS TLSGETLQVW DSDTQSCDFR GSVVSQDGAG NLNISANYHS SSSFSGKTIK
FAPSNGCKYV QVKYY
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