| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0699 |
|---|
| Symbol | |
|---|
| ID | 3966296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 904988 |
|---|
| End bp | 906502 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637919760 |
|---|
| Product | periplasmic protease-like |
|---|
| Protein accession | YP_526173 |
|---|
| Protein GI | 90020346 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000113276 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00239138 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAG TAAAGAATGG ATTGTTGGCG TGTTTATATA CTGTGGGTGT GGTTGCATGT
GGTGGCGCGA ATAACGAGAA AGTATATGAT GACTACATAG GTGTGTGGCA AGCAGACGGC
TATAACTATG CGCTGCATAT TGGTGTAAGT AAAAGCAGCG CCAACCAAAA TAAAGAGTAC
TCGCTTAAAC AATATTCCTA CACGCAAGAC CACTGCTTGC TGCAGCGCGA GGTGGCAGGC
TATTCGTTAA GTGAACTACA GCAAATTGTA AAACTGGGGC ATGGGCAGGT AGTTTTCGAG
TTTATCGAAC CCGGGCAAAG CCTAAGCCCT GGCATACGGT ACACCAAGCA AGAAACATTG
CCGGCTGCAT GTCGCCACAA TTTAAGTGCT GTGGCGCATC AAAAAAATTA TCGTTTTGAT
GCAGAGCGCG ACTTCGACAT TTTTTGGCAA ACTTTCAGCG AGCTGTATGT TAGCTTTGAT
GAGGCCAATA TCGACTGGCA AGAGATTGAG CTGGAATTTC GATCTAGATT ACAACTTGTA
CAAAACGAAA ACGACCTGGC CGTGCACTTT GCGCAAATGA TAGAACGCAT ACAAGATGGC
CACAACATTG TAGTGAAAAC CGAATTAACG GCCGACTTTG ATGCAAGTAT GCGCGCTAAT
TTAGCCAGTG GCGAGGTAGA TGTATACAGT TACCCGTTAA AACCAACTTA TGCAGACCTA
TTAATAGAAG AGTATGTACA GCAAAATAAC ATTGCGTTGC CATTATCGAA TACCGATAAG
CAAAACGCGT ATGCTTATGC AGAAACACAG CTGGATTTGT ATTACGCCAA TATTTTTAAT
TTAGCCACAA CCGAAGTGCA TGCTAGAAGT AATGATCACT TTATTTGGAC AACGCTCGAA
AATAATATTG GCTACATACT TATTAACCAA ATGGATGGCT ATACGAGCGA ATTTTTAGAT
TTGGCCGCCG ATAAAAGCGC GGCACAAACA CAAATAGATG AAGCGGTAGC TGAGCTGCAA
GATACTCAAG CCATAATAAT TGATGTGCGA TTAAACGAAG GCGGCTTTGA TGAAGTTGGC
CTTGTGTATA TAAGCCGCTT TTTAAGTGAA TACACCGCGC TTTATTCTAA GCGTGCGGCG
CCCATACAAA AAAGGGAAAT ACCCTTAGAT GTATGGCTGC GCCCAGACGG CGAAATACAA
TACCTTAAGC CGGTAGTAGT GCTAACCAGC GCAACCACAT TTAGCGGTGC AGAAGTGTTT
GCCCTAGCAA TGCGTGAGCG CGCAAACACT ACCATAGTGG GAGAACGTTC GGGCGGCGGT
TTTTCAGATA TTTTATTAAA ACGCGTTAGC TCAAATATTG CCTTTGGCCT AAGTAACGAA
GTGTACACAA GCCCGCGAGG CGAATGGTTT GAGCGCTTAG GCGTGCCTGT ACACCACGAA
GTGAGTATGC CTACAAAAGC TCAACGAGAA AACGGTTTAG ACCCAATGCT GCAAAGGGCG
CTAGAGCTTT TCTAG
|
|---|
| Protein sequence | MKRVKNGLLA CLYTVGVVAC GGANNEKVYD DYIGVWQADG YNYALHIGVS KSSANQNKEY
SLKQYSYTQD HCLLQREVAG YSLSELQQIV KLGHGQVVFE FIEPGQSLSP GIRYTKQETL
PAACRHNLSA VAHQKNYRFD AERDFDIFWQ TFSELYVSFD EANIDWQEIE LEFRSRLQLV
QNENDLAVHF AQMIERIQDG HNIVVKTELT ADFDASMRAN LASGEVDVYS YPLKPTYADL
LIEEYVQQNN IALPLSNTDK QNAYAYAETQ LDLYYANIFN LATTEVHARS NDHFIWTTLE
NNIGYILINQ MDGYTSEFLD LAADKSAAQT QIDEAVAELQ DTQAIIIDVR LNEGGFDEVG
LVYISRFLSE YTALYSKRAA PIQKREIPLD VWLRPDGEIQ YLKPVVVLTS ATTFSGAEVF
ALAMRERANT TIVGERSGGG FSDILLKRVS SNIAFGLSNE VYTSPRGEWF ERLGVPVHHE
VSMPTKAQRE NGLDPMLQRA LELF
|
|---|
| |