Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0696 |
Symbol | |
ID | 3966293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 899044 |
End bp | 901956 |
Gene Length | 2913 bp |
Protein Length | 970 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637919757 |
Product | hypothetical protein |
Protein accession | YP_526170 |
Protein GI | 90020343 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000664901 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000149874 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGACTATCA CGACTTTTCA ACCACTAGCC GCGCCTAAGC AAGCACGCTT TGGGCACTCA AAAAAATTAC TTGCTGTACT TGTGGCTGCC GCTGCAATAC AAACCCCTAC TACATTTGCG CAGGAAGAAT CGAGCAATCA GCTTGAAGAA GTAGTTGTAG TTGGTTCACT GCGCAACACT ATGCGCAACT CTATCGAGAT TAAGCGCGAC GCAGAATCCA TTGTGGATGT TATCTCTGCG GCAGAAATGG GCGCTCTGCC AGACCTTTCT GTAGCAGAAA CCCTGGAGCG TATTGTGGGT GTAACCGGCG ACCGCTTTAA AGGCAATGCC AGTGAAATTT CTGTACGTGG CCTTGGCCCA TTCTTAGGTT ATTCCACTTA TAACGGCCGC GAAATTTCAT CCGGTAGTGG TAACCGCTCT GTTGCTTTCT CGCAATTTCC GTCAGAGCTA GTAAACGGCG CCGTTGTTTA TAAATCACAA ACCGCCGACC TAGTTGAAGG TGGTGTTGCA GGCTTAATTA ACTTACAGAG CTTGCGCCCG TTAGATTACG GTAAACGCCG CATTCAGGCC GAAGTTAAAG CCAACTACAA CGATTACGAT GCGAAGCTAA ACGGCGACGA CGGTATTGGC TACCGCGGTT CTGTGTCGTA TACCGATATT TTTGACACCG ACATAGGTGC CATTGGTGTA GCAATAGGTT ATGCCAGCCA CGACTCCTCT ACCCCAGAAG AAAGCTACAA CACCAGCTCT AGCTTGCGCA ACTGTAACTC CGACTACTTT GAAGACGGCG GCAGCAATTG CTCTTGGAGC GATAGCAATG CAGCCGCAAA TGGCGGTGCA GCGGCAGACG GCGAATACTA TTTTATTCCC AATGCTTTTT ACTTCCGTCA GATGGAATCT GAAGAAACTC GCGATGCGTT AATGGCAACC GTGCAGTGGC AGCCCAATGA CGATTTAAAT ATTGTTGCCG ACGCGCAATG GTCCGACCGT TTTTACTACG AAGATCGCCA CGATTTATAT TTTGATGATG GCCGTCGTCG CATTGGTAAC TGGACCACCA ACGACTCTGG CGCACTTACT TCATACACTG GTGAATCGCG CGTAAGCACC TACGGCGAGT TCAGAGAGCG CGATGAAGTT TATAAAGGTG CGGGCTTAAA CGTTGAGTGG CAAGTAAACG ACAAACTTAT TGTAGATGCC GATATTTCTT ATTCCGATAC CGTGCGCTAC CAAGAAACCT GGCAAACACG TTTTAGATCA GACCGCCTAT GGTATGACTT CGACACCGCT GGTGACTACG GCAGCAGCTG GCCAACCGTT AGCTTGTACA CCGATAGCGA CGATGCAGCA AGTTCTGAGA TCGATTACAG CTTGCTAAAC GATTACGACT TTTACGATGC AAACCAGCGT GCACGTTACG GCGAAGCAGA AGTAAACGAT TCAATTAGTG CACTGGCAAT TAATGCCGAT TACTTATTAG AGGGCGACTT TATTACCTCT ATAGAAGGCG GCATGCGTTT ATCTTCGCAC GAGCATAAAA ACTACGGCGA AGACCGCGTT GAGTTTACCG CTACCGATCA CGCAGACATT ACCGATATAG CCTCTGGCTG TGCAACTGCC TTCCCGCAAT CTGGTTTTGG TGACGATGCA GGCGGTAACC TCACCGAGTG GGCTACCTAC GACACCCTGT GCGCATTCGA CCTAATGGTT GGCGACGAAG ATATGTCGTT AACCCCGGAA GCAGCAAGCG CAGGCGATGT AATTCTTAGC GAAAATATTA ATTCTGCCTT CGCTAAGTTT AACTTTAACA CCATGCTTGG CGGTGTTGAT GTTTCGGGTA ACTTTGGTGT TCGCGTTGTG CAAACCAATG TTGAATCTGT TGGCTATCGC CAAGATTACA GCGTAGTAGC AAATGACGCA GGCACACCTG CAGATACTTC GGACGATACT GTAACCATTA CCGAAACCGA TGGCACACTA AAGAAAGAAG TTTACAACAA CGATTACATC AACGTATTAC CTAGCTTAAA CGTAAACTTT ACGCTTAACG AGGAAGTGCA AATACGTACG GCTATTTACG GCGCAATTTC CCGCCCAGAT ATGTGGTGGA TGGGCGCTGG TCGCGACCTA GACCTAGGTG ATGGCGAAGA AGATTTTGCA AGCGTAGCAG AAGCCGTAGC GGCGGGTAAT GCCACAGCGC TGGGTAACCC CAACATGGAA GCCATTGAAT CCATGAACTA CGATCTATCG GTTGCTTGGT ACCCATCTGA AGACACTATG CTTTCTGCTG CGTTCTACTT TAAAGAGTTC GAAGCGGGCC TAGATGTTGC GGATTCCTCT ACAGTACAAG AGTCGTTCAA TATTAACGGT ACCGACATCA CTATGGATGT GAACGGCTTA ATTCAAAATA CCAGTGAGGC CTCTAACATT TCTGGTGTGG AACTAAGCTT GCAGCACGGC TTTACCACCT TGCCACAACC TTTTGATGGC TTAGGTGTAA TGGCGGGCGC TAACTTTGCC GATACCAACT TCGACTACTT CGAAAACGGA GTAGACATGA CCGACGACGT AGTGATTGCA CCAGCAAGCT TGCCGGGCTT CTCTAAGCAA AGCTACAACG CAGAGGTGTA CTGGGAGAAA TTCGGTATTA CTAGCCGTTT ATCTTACAAA TATCGTTCGG ACTACCTAAA ACCTTTCGGT AGCGACTTTG GCCAAACTAA CCGCTTTGTA GAAGACACAA GCTCTGTAGA TTTATCGTTA GCTTACAACG TAACTAAAAA TGTACAGCTT AAATTTCAAG CGCTTAACTT AACCAACGAG CCTTACGCAG AATACCGCGT GACAGACGGT TCGTATAACC GCATTGAATA TAGCGGCACT AAGTTCTTTG TTGGCGTACG CGTTAAACTG TAA
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Protein sequence | MTITTFQPLA APKQARFGHS KKLLAVLVAA AAIQTPTTFA QEESSNQLEE VVVVGSLRNT MRNSIEIKRD AESIVDVISA AEMGALPDLS VAETLERIVG VTGDRFKGNA SEISVRGLGP FLGYSTYNGR EISSGSGNRS VAFSQFPSEL VNGAVVYKSQ TADLVEGGVA GLINLQSLRP LDYGKRRIQA EVKANYNDYD AKLNGDDGIG YRGSVSYTDI FDTDIGAIGV AIGYASHDSS TPEESYNTSS SLRNCNSDYF EDGGSNCSWS DSNAAANGGA AADGEYYFIP NAFYFRQMES EETRDALMAT VQWQPNDDLN IVADAQWSDR FYYEDRHDLY FDDGRRRIGN WTTNDSGALT SYTGESRVST YGEFRERDEV YKGAGLNVEW QVNDKLIVDA DISYSDTVRY QETWQTRFRS DRLWYDFDTA GDYGSSWPTV SLYTDSDDAA SSEIDYSLLN DYDFYDANQR ARYGEAEVND SISALAINAD YLLEGDFITS IEGGMRLSSH EHKNYGEDRV EFTATDHADI TDIASGCATA FPQSGFGDDA GGNLTEWATY DTLCAFDLMV GDEDMSLTPE AASAGDVILS ENINSAFAKF NFNTMLGGVD VSGNFGVRVV QTNVESVGYR QDYSVVANDA GTPADTSDDT VTITETDGTL KKEVYNNDYI NVLPSLNVNF TLNEEVQIRT AIYGAISRPD MWWMGAGRDL DLGDGEEDFA SVAEAVAAGN ATALGNPNME AIESMNYDLS VAWYPSEDTM LSAAFYFKEF EAGLDVADSS TVQESFNING TDITMDVNGL IQNTSEASNI SGVELSLQHG FTTLPQPFDG LGVMAGANFA DTNFDYFENG VDMTDDVVIA PASLPGFSKQ SYNAEVYWEK FGITSRLSYK YRSDYLKPFG SDFGQTNRFV EDTSSVDLSL AYNVTKNVQL KFQALNLTNE PYAEYRVTDG SYNRIEYSGT KFFVGVRVKL
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