| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0687 |
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| Symbol | |
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| ID | 3964938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 875475 |
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| End bp | 877067 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919748 |
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| Product | peptidase M22, glycoprotease |
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| Protein accession | YP_526161 |
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| Protein GI | 90020334 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000276719 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAATGAGA CTAATACTGG GCTAGGTAAT GATTGTTGCC GGCCAATAGC ATCCGGGCCA
GCGCTGCTCG AACTCATACG CAGTGTGCGC GCGCCATTAG CTGTTTATAA AGATAAGCAT
GGCAGCTTAT CTGTGTATCC CGCCACAAAA GACGTTACCG TTACCAACGA TTACTCCCCT
GTAGCAACGC TGCCCCCCTT ATACCCAGAA TGGTTGGGCG ATAGAGGCTT TTGCGCAGTT
CACGGTGTGC GCTTTGCCTA TATTGCTGGT GCCATGGCGC GAGGTATTGC CTCTATAGAC
ATGGTGGTAG CCATGGGCAA AGCCGGCATG ATGGGGTTCT TGGGCTCTGC AGGTCTAAGC
GTAGAGCAAA TTCAACAGTC AATCTGCGCC ATTCAAGCGA GTCTAAATAA CGGTGAAGCC
TGGGGCTGCA ACCTTATTCA TACACCCGAT GCACCAGATT TAGAGATGAG CATAGTGCAG
CTTTTTCTGC AGCTGGGTGT AGCTCGTATT TCAGCTTCTG CATTTATGAG CATGACTCCT
GCATTGGCGG CCTATGCTTA TAAAGGTATC TATCGCGATC GCGATGGCGT TATTTGTCGC
GCTAATTACG TTTTTGCCAA AATATCTCGG CCAGAAACCG CAGCCGCTTT TATGAAACCC
GCACCGCAGG CCATGCTCAA GCAATTACTT GAGCGGGGTT TACTAACTGA AGCCGAAGTG
CAATTGGCGC AAAACTTGCC AGTTTCCGAA GATATTACCG TCGAAGCGGA CTCTGGTGGA
CACACCGATG GTCAAATTCT TACTGCGCTG TTTCCTACAA TTCTCGATTT AAAACATCAG
TTAAGTGAGC AGTACCAATA CCAACGCGAT ATTCGCATTG GCGCAGCGGG AGGCTTAGGC
ACGCCCTCTG CTATTGCCGC GGCCTTTGCG TTGGGGGCTG CCTACGTACT TACTGGGTCG
GTAAATCAGG CATGTATAGA AGCAGGTACT TCTCAGGCTG TTAAGCAATT GCTAACGCAA
GTGCGCACAG GTGATGTGGC CATGGCGCCC TGCGCAGATA TGTTTGAAGC TGGGGTAAAG
GTGCAAGTCT TAAAGCGCAG AACCCTATAT GCACCAAGAT CTACCAAGCT TTACGAAATA
TATAAACGCT ACGACAGTCT AGAAGACATT CCTGCAGCAG AATTAGACCA ATTAGAGAAA
TCCATATTTC GTCAATCATT AACAAGCGTT TGGCAAACAA CCAAACGCTT TTTTGAAACC
AGAGATCCAG CGCAATTAGC GAAAGCAGAA GCGAACCCAA AAGTGAAAAT GGGATTAATT
TTCCGCTGGT ATTTAGGCAG CAGCTCGCGC TGGCCAATTG ATGGCGACGA AGATAGGTTG
GTGGATTACC AAATATGGTG TGGGCCAGCA CAAGCGGCCT TTAATGATTG GGTGCGGGGC
AGCTTTCTAG AGCCAGCAGA AAATAGAGCA GTAGTGCAGG TAGCTCGCAA TTTGTTAGAA
GGCGCGGCCA TAGTCACCCG CGCGCAACAG CTGCGTACCT TTGGCATAGC TGTACCGCAA
AATGCCTTTG CTGTGGTTCC GCAAAAGCTA TAG
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| Protein sequence | MNETNTGLGN DCCRPIASGP ALLELIRSVR APLAVYKDKH GSLSVYPATK DVTVTNDYSP
VATLPPLYPE WLGDRGFCAV HGVRFAYIAG AMARGIASID MVVAMGKAGM MGFLGSAGLS
VEQIQQSICA IQASLNNGEA WGCNLIHTPD APDLEMSIVQ LFLQLGVARI SASAFMSMTP
ALAAYAYKGI YRDRDGVICR ANYVFAKISR PETAAAFMKP APQAMLKQLL ERGLLTEAEV
QLAQNLPVSE DITVEADSGG HTDGQILTAL FPTILDLKHQ LSEQYQYQRD IRIGAAGGLG
TPSAIAAAFA LGAAYVLTGS VNQACIEAGT SQAVKQLLTQ VRTGDVAMAP CADMFEAGVK
VQVLKRRTLY APRSTKLYEI YKRYDSLEDI PAAELDQLEK SIFRQSLTSV WQTTKRFFET
RDPAQLAKAE ANPKVKMGLI FRWYLGSSSR WPIDGDEDRL VDYQIWCGPA QAAFNDWVRG
SFLEPAENRA VVQVARNLLE GAAIVTRAQQ LRTFGIAVPQ NAFAVVPQKL
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