Gene Sde_0641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0641 
Symbol 
ID3964970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp810673 
End bp811470 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content48% 
IMG OID637919702 
Producthypothetical protein 
Protein accessionYP_526115 
Protein GI90020288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAC TCACAGATGT TGGTCAGACC CTTGTTAATA ATATTAGCTC TCGCTATGGG 
CTAAGTAATG ATGCCGTTAT TCATATGTTG GTTGCGGTAA ATAATGGCGG CGGTTCGATG
GCGCAATTTT GCTGCCCTGA GCTGGGCGGT TCGGGCCAGT GGATGCGCGG CGGAATGACA
ATGGTTGGCG ATATGTTTAA CCACGGTTTA AAGGCTACAG TCGATAACCT GTGTAACGAG
CTTGCTAATG TATTGGCCAA TAATCAGGTT TTTCCGGTGG TGCCAGCGGG CACCCCTGGC
AGCAATCAGT GGTGGCCAGC GCATTTAGGC AGCCCTTTTA GCAGTGGTGG GCAAAATAAT
ATTCGCTATG CGGTGTTTCC TAATCGCTTG GCGGTAGAGC TATATGGGCA GGTATCTGTT
TACGATACGC TTAATCATAA TATTGGCGGG GTGAGCCAGC AGCAAGGCGG GGATACTTCG
CTAACGTTTA GTAGCCAGTT CGGTACTATT TCAGTGTCTA GCCTACCATT GCTGTCGGGG
CCGGGAATTG CGCCTGCACC GCAAACCAAT TTTGCTCAAG CTAGCTCAAG TAATAGCAAT
AGCTATACGG CTAACAATGT AAACACCGAT GTAAGCGTAG ATATGGCTGG TGGGCAAATA
GATGCGAGTA ATCAGCCCGC AATGGATGTA AATACAGCGT TAGATTACAT AGGTAAGCTA
GCGCAATTGC GCGATAGTGG TGCGCTTACC GATGAGGAAT TTAATGCGAA AAAAACCGAG
CTTTTGCAGC GAGTTTAA
 
Protein sequence
MQKLTDVGQT LVNNISSRYG LSNDAVIHML VAVNNGGGSM AQFCCPELGG SGQWMRGGMT 
MVGDMFNHGL KATVDNLCNE LANVLANNQV FPVVPAGTPG SNQWWPAHLG SPFSSGGQNN
IRYAVFPNRL AVELYGQVSV YDTLNHNIGG VSQQQGGDTS LTFSSQFGTI SVSSLPLLSG
PGIAPAPQTN FAQASSSNSN SYTANNVNTD VSVDMAGGQI DASNQPAMDV NTALDYIGKL
AQLRDSGALT DEEFNAKKTE LLQRV