| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0622 |
|---|
| Symbol | |
|---|
| ID | 3964951 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 786017 |
|---|
| End bp | 787336 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637919683 |
|---|
| Product | alkaline phosphatase |
|---|
| Protein accession | YP_526096 |
|---|
| Protein GI | 90020269 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.898935 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAT TCGAACAAAA AATTGTGGTA AATCAGCTTC AAATAGGCAT GTACGTTTGC
CGACTAGATA GGTCGTGGCA CGAAACCGAC TACCCATTGC AAGGCCTTTA CATAAAAGAC
CAAGCAGATA TCGACCACCT CGCAAAATAT TGCCAATATG TGTTTATTGA CGAAAAACGC
AGTCGCAGCG CGCTGATACC CAAGCACACT CAAGCAATAA CACAAAACCC GCCTCAACCG
CTGCGAGCCG TACCAAATAC TACTCCTTTT TTTATCGACC CCAAGAGTTG GCGTCAGCGC
CATTGTGTTG AACACTACAG TGTAACAACC ACATTAAATG CTGAATTAAA GTTAAGTGCG
CCACTTATGT ACTTACTAGA AGAGCAACTG GCTTATTTGA TCGACAAGAT AAACCGTCGC
CGCCGATTTG ATATTGAGCC TATAGCCGAA AGCGCCGCCG ATTTAGTAGA AAGCTTAATT
CGCAACCCCG ATGCACTGGC CTGGCTTTGC CAAATAAAGC TCACGCGCAG ACCTATTTAT
TTGCACATTA TGCGCTTAGC TGTTTGGGGT GGCATAGTGG GCCGGCAAAT GGGGCTTAAT
CGCTTTTCAC TCGTCCACCT CACCATGACT CTAATGATGA CAGGCATTGG AAAAAGCCTG
ATAAAACAGG AGATACTCAG CAATCACAAC GTGTATAACC ACACCCCCGA ATACCAAGAG
CATTTAACAG AAACGCTTTA CTATTTAAAA CAGAGCCACT TTTCTTGTGA AGATATTATT
TCTACTATTC AAGCCTATTG CGAACGACAC AACGGCAGCG GCTACCCCAA CGCGCTAACT
GGGGGTAAAA TTCCATTTCT AGCACGGGTA GCTGGGCTTG TAGATACCTT CGATCTAATG
GTGCACCCCT ACGAAGCCAA GCAATCCATT TCACCGGGCA ATGCTATTGC CCGCCTTAAC
AAATGCAAAG GCACACTGTT TGACCCACAC TTGGTAGAAA CATTCGTACA GGCCATTGGT
ATTTACCCTA CCGGTTCGCT GGTGGAAATT AACAACGGTA TTATTGGTGT TGTGGTTTCA
CAGTCCTATG AGAAGCGTAT ACAGGCCGCC ATCATCCCGC TTATAAATCG CGACAAAAAA
CGCTTTGCTA AATTCAAAAT ATTCGATTTG CATCTAACAG GTTCAGATGC CATGCAAAAC
GATAGAATTA TAATAAAACG CGGGCTTCCA TTTCATTTAG CGCCCCCCAA ATTAGTGGCT
GCCGCACACG AGCAGTTGTT TGAAGAGAAA AAAGGCTTTT TTACGAAAAT ATTCGAATAA
|
|---|
| Protein sequence | MELFEQKIVV NQLQIGMYVC RLDRSWHETD YPLQGLYIKD QADIDHLAKY CQYVFIDEKR
SRSALIPKHT QAITQNPPQP LRAVPNTTPF FIDPKSWRQR HCVEHYSVTT TLNAELKLSA
PLMYLLEEQL AYLIDKINRR RRFDIEPIAE SAADLVESLI RNPDALAWLC QIKLTRRPIY
LHIMRLAVWG GIVGRQMGLN RFSLVHLTMT LMMTGIGKSL IKQEILSNHN VYNHTPEYQE
HLTETLYYLK QSHFSCEDII STIQAYCERH NGSGYPNALT GGKIPFLARV AGLVDTFDLM
VHPYEAKQSI SPGNAIARLN KCKGTLFDPH LVETFVQAIG IYPTGSLVEI NNGIIGVVVS
QSYEKRIQAA IIPLINRDKK RFAKFKIFDL HLTGSDAMQN DRIIIKRGLP FHLAPPKLVA
AAHEQLFEEK KGFFTKIFE
|
|---|
| |