| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0614 |
|---|
| Symbol | |
|---|
| ID | 3965021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 775829 |
|---|
| End bp | 777019 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637919677 |
|---|
| Product | SAM-dependent methyltransferase |
|---|
| Protein accession | YP_526090 |
|---|
| Protein GI | 90020263 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTAG AGACGTTAAT TCTTAACCCG CAGGCGGAGC GCCGCATTCG CAAGGGGCAC
CTTTGGGTTT ATTCCAACGA AGTAGATGGC AAGAAAAACC CGCTAACAGG CTATGAGCTT
GGCCAGCAAG TGCAGGTTGT TAGCGCTAAG GGGCAGGTGT TGGGCGCGGC TACATTGAAC
CCGCAGTCAC TTATTTGCGG CCGTATTTAC AGTCGTAATG GCGATCAAGA ATTATCAAAA
AGCTTTTTAG CCAAACGTAT TGAGCAGGCG CTAACCTTGC GCGAAGCGTA TTTCGATAAG
CCTTATTATC GTTTGGTTTA CGGTGATTCT GACTTTTTAC CTGGTGTGAT TGCAGATAGA
TACGGCGACT ACCTTGTGGT GCAAATAGCC ACCGCAGGAA TGGAGGCGGT TAAAGATGAG
TTGCTACGTG CCTTCGATAA GGTGCTGGCC CCTAAGGGCA TTGTGCTTGC TAATGACCAC
AGTGCACGCA GCTTAGAGGG GTTACCCGAA TATGTAGAAA CCGTTGGCGA GGTGCCAGAA
TATTTGCGTG TAGAAGAAAA CGGCACCCAG TTTGATATCC CTTCATCTGG CGGGCAAAAA
ACCGGCTGGT TTTACGATCA CAGAGTGAAT CGCGCCGAGC TGCAAAAATG GGTAAAGGGC
AAAACTGTAT TGGATGTGTT CTCTTATGCT GGCGGTTGGG GGGTTGAAGC CGCCAATGCT
GGGGCCGAAT CTGTTACCTG TGTAGATGCT TCAGAGCAGG CGTTAGATTT AGTTGAGCGC
GCAGCGGAAT TGAATGGCTG CGACGACAAG GTAATGGCAA TACAAGGTAA AGCTATTCAC
GTTTTAAAGT TGCTTATAGA AGAGCAGCAA AAATACGATG TGGTAGTATT AGACCCGCCT
GCGTTTATTA AACGCAAGAA AGATCAAAAA TCGGGTGAAG CGGCATACCG CCATATTAAC
GAATTAGCCA TGCGCTTATT AAAACGCGGT GGTTTGTTGG TATCTGGCTC TTGCTCTATG
CATTTGGCCA ACAGTACGCT TACCGATATA GTGCGCGCAG CAGCAGTGCA TTTAGATAGA
GATGTGCAAT TGGTATATAG TGGTGTGCAG GCGCCCGATC ACCCTCAGCA CCCAGCCATT
CCAGAAACCC ATTACTTAAA AGCGCAATTT TTCCGCGTTT TACATCGGTG A
|
|---|
| Protein sequence | MALETLILNP QAERRIRKGH LWVYSNEVDG KKNPLTGYEL GQQVQVVSAK GQVLGAATLN
PQSLICGRIY SRNGDQELSK SFLAKRIEQA LTLREAYFDK PYYRLVYGDS DFLPGVIADR
YGDYLVVQIA TAGMEAVKDE LLRAFDKVLA PKGIVLANDH SARSLEGLPE YVETVGEVPE
YLRVEENGTQ FDIPSSGGQK TGWFYDHRVN RAELQKWVKG KTVLDVFSYA GGWGVEAANA
GAESVTCVDA SEQALDLVER AAELNGCDDK VMAIQGKAIH VLKLLIEEQQ KYDVVVLDPP
AFIKRKKDQK SGEAAYRHIN ELAMRLLKRG GLLVSGSCSM HLANSTLTDI VRAAAVHLDR
DVQLVYSGVQ APDHPQHPAI PETHYLKAQF FRVLHR
|
|---|
| |