Gene Sde_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0608 
Symbol 
ID3965015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp767689 
End bp769047 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content44% 
IMG OID637919671 
Producthypothetical protein 
Protein accessionYP_526084 
Protein GI90020257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAATA AAATCCTATT GGCGCTTGTA TTGTGTGGAG CTTCTGCCTC TGCCTTTGCG 
GCTAGTAATC GTCCTAGTGG TTACACAACT ATCTGTAAAA CCGATCAAAC TTGTTCTGTA
AGCTCGTCTA CCAACGTTGC GTTCGGCGCT GCTGGTAAGT TTGTTTACAA AGTAATTAAC
GGTACCTTTA CTTGTAATAC ATCTACTTTT GGCAGCGATC CTAACCCTGC TAAATCTGTA
AAAGAATGTT CTGTACCTAC TAATGGTTCT TCTAGCACTA GCAGCACCAG TAGTTCTTCT
AGCTCTAGTT CAAGTAGCTC ATCGGGTTCA AGCAGCTCAT GTGGCACTGG TGGCGGCGCA
ACTGTATGTT TAAGTGCAGG TGGCGGCAGT AACGATATCG ATTTAACTTG GACAGTATCT
GGTTCTATTT CTAGCGCTCA GGTTTACCGC GACACAGATT CTAACCCTAG TGGTCGCACA
CGTATTGCTC AATTAGGTGG CGATGCAAGA AGCTATAGCG ATACGAATGT TAGTGCTGGT
AAGCAGTACT ACTACTGGAT TAAGTTTGGC GCCAACGGCT CTAACTACAA TTCGAATGCG
GCTTCTGCTA CCTATAGTGG TTCAAGTAGC TCATCGAGTT CTTCAAGCTC TTCTAGTTCC
TCATCTGGCG GCTCGGCTGA ATGTAAAGCT GGCGCTACTA TTTCTGGTAA AACCGTAGAT
TGCGGTGGTA AAGAAATTGG CTTGTCGTGC TCGGGTGATA GTGAAACTCA ACCACCAGTA
TTAACGCTTA AAAATGCCAC CATTAAAAAC TTGGTAATTT CTGCTAAAGG TGGGTCCGAC
GGTATTCACT GTACTGGCAA CTGCACCATG GAAAATGTTG TTTGGAAAGA TATCTGTGAA
GATGCTGCTA CCAACAAAAC CGACGGTATT ACCATGACCA TTATTGGTGG TAGTGCGTAT
AACTCTACAA GCGGTTACGG CGGCAAGCCA GATAAGGTTT TCCAACATAA CTCTAAAAAC
AGTACTACTG TAATTAAAGG CGGCTTTACA TTAACAGGTG AGCACGGCAA ATTGTGGCGT
TCATGTGGTA ACTGTACTAA TAACGGCGGC CCACGTAATG TGACTATCGA CAACGTTAAA
GTAGACGCGA AAATAGGCAG TATTGTTGGC GTTAACCGCA ACTATGGCGA TAAGGCAACA
ATCAAAAACT TAAAGATTAA AGACTACAAA TCTGGTAGCC CCAAAGTGTG TGAAGAATAC
AAGGGTGTAC AAAAGGGTAG TGGCGAGTCT TCTAAGTATG GCGAATACTG GGATACTGCA
AACTGCGATG TAAGTAAATC AGATGTGTCT GCTCTTTAA
 
Protein sequence
MRNKILLALV LCGASASAFA ASNRPSGYTT ICKTDQTCSV SSSTNVAFGA AGKFVYKVIN 
GTFTCNTSTF GSDPNPAKSV KECSVPTNGS SSTSSTSSSS SSSSSSSSGS SSSCGTGGGA
TVCLSAGGGS NDIDLTWTVS GSISSAQVYR DTDSNPSGRT RIAQLGGDAR SYSDTNVSAG
KQYYYWIKFG ANGSNYNSNA ASATYSGSSS SSSSSSSSSS SSGGSAECKA GATISGKTVD
CGGKEIGLSC SGDSETQPPV LTLKNATIKN LVISAKGGSD GIHCTGNCTM ENVVWKDICE
DAATNKTDGI TMTIIGGSAY NSTSGYGGKP DKVFQHNSKN STTVIKGGFT LTGEHGKLWR
SCGNCTNNGG PRNVTIDNVK VDAKIGSIVG VNRNYGDKAT IKNLKIKDYK SGSPKVCEEY
KGVQKGSGES SKYGEYWDTA NCDVSKSDVS AL