| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0575 |
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| Symbol | |
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| ID | 3964866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 710271 |
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| End bp | 712958 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637919638 |
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| Product | hypothetical protein |
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| Protein accession | YP_526051 |
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| Protein GI | 90020224 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0502043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCCT TTAATGAAAT GGAATTTCGC CACAGCTGGC GCCCCTACCA AAAGCGCGTA
CTCGATGCCG TACACCAACA TCTAAACGAC AAACGCCTGC ATATTGTTGC TGCACCTGGC
GCAGGAAAAA CAACCCTGGG GCTAGAAGTA TTTAGGTTAC TCGGTAAACC CGCAATTGTG
CTATCACCCA CCCGCGTAAT ACGCGACCAA TGGTTAGATC GCCTAACGGA CTTTTGCCAG
CTGGACGACA TTAATAAGCT AAATTGGGTT AGCAACACAT TATTAACACC CAAAACGCTT
ACATCTATCA CTTACCAAGC GTTACATTCG CAATTTGCAC AAGAACTGAA TCAACAGGAT
ACAACCCAAG ATGCAGATGA AGCAGAAGAG TTGGAGCTAG ATAAAGGACT AAAAGACGCA
GAACTCAATA ATTTTATTAG TATTCTCGAG CAGTATAATA TTCAAGTACT TATATTAGAC
GAAGCGCACC ACCTACGCGC AGAGTGGTGG CGAGCACTTG AAAAAGTGTG CAATCACTTG
CCCAATATTA CCCTTGTATC GCTTACCGCC ACACCACCCT ACGATTCTGA GCGCAATGAA
TGGAGCCGCT ACGAGCAATT GTGCGGGCCA ATCGACGAAG AGATTTCGAT ACCGGAATTA
GTAAAAGCAG GTACGCTCTG CCCTCATCAA GATTACATAT GGGCATGTAA TGCTACAGTA
GAATTCAGTA AACAAATAAA AGAGTACGAC CAACGCGTAT CCTCAACCTG CAAAACACTC
TTCGCAAGCG CTGAGTTTGA ACAGGTTGTA TTGGCCCACC CTTGGCTAAA CAGTAACAAT
ATAGAAGACT GGGTAATCAA AGAGCCGAAA ATAGCAATTG CATTACTAAG CTTTATAAAA
GCAAAAGCAC TACCGCCCAA CAAACCACTT ATGCAACTGC TCGACCTCAC ACAGCAAGAC
ATACCCGAGT TGGGAAAAAA GTGGTGGCAA ACATTAGTGG AAGCTGTGCT TTTTTCTAAA
ACATTTGAAC ACAATGAATC AAACAAAAAA TTCATTGAAG CGCTTAAAAA ACAACTGCGC
GCGGCGGAGC TACTGTATAA AACAGAATTG TCGTTTGAGC ATTCTCGCAG AATGGAACGG
TCTTTATCAC TAAGTGCAAC CAAAATAGAT GCCTGCCTAG ATATTCATAA GCTCGAATAC
AGCAAGCGTG GCGATGCACT GCGGCAAGTA ATTTTAACCG ATTATATTCG TGACGAAGCG
CTTACATCGG GCATGGACAC CGGCGCACTT AATCTTGGCG CTTGGCCAAT TTTTAAAACA
CTAACTTCCT CCTCTCCCAT TGCTGACCAA ATTGCGTTAC TTACCGGCAG GCTTTGCATA
GTGCCAACCA GTAAATTAGA TGCACTACTG AATCATTTAG GTAGCGGAAA CTTTAAAACC
GAGCCAATGG GCAACAAGCA ACAGTACCAA AAAGTAACTG GCCCGTTAAA CCGCTTAACC
GGTGCGTTTA CTGCATTGTT AATCGAAGGA AAAATAAAAG TGTTAGTTGG CACACGTGCA
CTACTAGGAG AAGGCTGGGA TGCCCCTGTC GTTAATTCGT TAATACTCGC CAGCTCGATT
GGTTCATTTA TGCCAACCAA TCAAATGCGT GGCCGAGCAA TACGTATAGA CCGCCAAAAT
AGCGATAAAG TTAGCTCTAT ATGGCACCTA GTAGCCATAG ACCCAGACAG TTTTGGCGGC
TGGAGCGACT ACCATAATCT TAAAAAACGT TTTGATACGT TTGTAGGCCT ATCTGAAAAA
AAGCAAACCA TCGAAAGTGG ATTCGAACGC ATGCACGCTA CTGCAATTGA ATCAGACTTT
AAACTCACCA ACAGCACGCC AATAGCGCTA AACAACTTCC AAATGCGTAA CAGGTACAAC
AAGATACACA GTATCGCCAA ACGCTGGCAA AAAGCGTTAA CCCTTAATGC TAACGCACGT
GTTATACCCT CTGTTAAAAC AGAAAAGTCG CCACGTATTC GCGGTTATAT GCTGCGCTAC
TCGCTAAAAT ATTTGTTCAC TCAGCTTATT GGCTTTATGG TTATTGCAGG TATTTATTCT
GTCTATGCTG CTCCCATGGC ACGCGGGCTT TTTCCCTACT TTATATTGGC GGCAGTAACT
GGCGTGTTAC TGTATAAACT ACCCAAAACG ATTGCCGTGA TTAAAATACT TATTCGCTAT
TTACCTACCG ATGGCGCACT TAAGCAAATA GGTATTGCCC TTACCGAAGC CCTAAGCCGA
GCGGGCTTTA TCGAAACACC TTTTCGAGAG TTAGACGTTC GAGTAGCAAC TATCGAAGAT
GGAAGCTATT ACCTTTCATT AGCAGGCAGC ACATTTTACG AATCGTCGTT ATTTGCTGAT
TGCTTAGCAG AAATTCTAGC GCCCATAGAC AACCCTAGAT ATATAGTTTT ACGTGAAGGG
ACGTTTATGG GAATGCGAAG AGATGACTAC CACGCAGTGC CGGTTATATT TACCACAAGA
AAGGAAACCG CTACTATTTT TTACAAAGCG TGGTGCAAAA ACGTTAGCCT TTCAGAGCTT
ATTTACACTC GATCTACAGA TGGCCGTAAA AAACTACTCA AAGCAAAGAT GAAAGCTTTT
TCATCTACAT TTAGCAACGA CGTAAAAAGA CAAGATAGAT GGCAATAA
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| Protein sequence | MSPFNEMEFR HSWRPYQKRV LDAVHQHLND KRLHIVAAPG AGKTTLGLEV FRLLGKPAIV
LSPTRVIRDQ WLDRLTDFCQ LDDINKLNWV SNTLLTPKTL TSITYQALHS QFAQELNQQD
TTQDADEAEE LELDKGLKDA ELNNFISILE QYNIQVLILD EAHHLRAEWW RALEKVCNHL
PNITLVSLTA TPPYDSERNE WSRYEQLCGP IDEEISIPEL VKAGTLCPHQ DYIWACNATV
EFSKQIKEYD QRVSSTCKTL FASAEFEQVV LAHPWLNSNN IEDWVIKEPK IAIALLSFIK
AKALPPNKPL MQLLDLTQQD IPELGKKWWQ TLVEAVLFSK TFEHNESNKK FIEALKKQLR
AAELLYKTEL SFEHSRRMER SLSLSATKID ACLDIHKLEY SKRGDALRQV ILTDYIRDEA
LTSGMDTGAL NLGAWPIFKT LTSSSPIADQ IALLTGRLCI VPTSKLDALL NHLGSGNFKT
EPMGNKQQYQ KVTGPLNRLT GAFTALLIEG KIKVLVGTRA LLGEGWDAPV VNSLILASSI
GSFMPTNQMR GRAIRIDRQN SDKVSSIWHL VAIDPDSFGG WSDYHNLKKR FDTFVGLSEK
KQTIESGFER MHATAIESDF KLTNSTPIAL NNFQMRNRYN KIHSIAKRWQ KALTLNANAR
VIPSVKTEKS PRIRGYMLRY SLKYLFTQLI GFMVIAGIYS VYAAPMARGL FPYFILAAVT
GVLLYKLPKT IAVIKILIRY LPTDGALKQI GIALTEALSR AGFIETPFRE LDVRVATIED
GSYYLSLAGS TFYESSLFAD CLAEILAPID NPRYIVLREG TFMGMRRDDY HAVPVIFTTR
KETATIFYKA WCKNVSLSEL IYTRSTDGRK KLLKAKMKAF SSTFSNDVKR QDRWQ
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