| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0537 |
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| Symbol | |
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| ID | 3968778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 657878 |
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| End bp | 659260 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637919600 |
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| Product | hypothetical protein |
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| Protein accession | YP_526013 |
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| Protein GI | 90020186 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTTTAT CTAAGCCCCT TACACCTAAG TCCCCTACCT TTTGGAAAAG CGTGCTATTG
CTTGCCCTGC CTGTTGCGCT GCAAATGCTA TTGCAATCGT TATTGGGTAT GGCCGATGTG
GTAATGGTGG GAGACCTAGG GCCAGAGGCC CTCGCCGCCG TGGGCTTAGC CGCCAAATTG
CACTTTTTAC TACTGGTTAT GATGAGCGGT ATTGCCGCCG GTGGCAGTGT GCTTATTGCC
CAGTATTCCG GCAGTAAAAA TAGCGAGGGC TGTCGCAATA CCTTATCGGT TACGCTTGCC
GTTGGTGTGG CGGTGATTAT GCCACTCGTG GCGGCTTTTG CTATTGCACC CCAGGTTTGG
GTTAACTGGA TTAACCCCGA CCCCATTGTA GTGGCCATTG CTGCTGAATA TATCCAAATT
ACTGCGCTGG TATTACTGCT TACCCAAATA GCGGTTATCT ATGAAGCGTC GTTGCGCGCA
TTGGGCAACA CCACGGTTCC GCTTATTGGC GGGGCTGTTT CTGTTTTAGT GAATATTGCG
CTTAACTACG CGCTTATTTT TGGTCATTGG GGGTTTCCTG CCATGGGCGT GGCTGGGGCG
GCTTGGGCCA CACTTATAGC GCGGGCAGCT CATATGATTT TAGTAGTGGG GTGGGTTTAC
GCCACGCGCC ATAGTTTTGC TTTAGGTGTG CGGGATATAT GCGCGCGGGT AGATTGGCCC
AAGGTTAAGC GCTATATAGT GTTCGCCTTG CCCCTAGTGG CGAATTACAC CCTGTGGGGT
GTGGGCAACG CCACTTACCA CGTGCTTACC GGTTTTGCGG GTACCGAAGC TTTGGCAATT
ATGGGCGTGA TAGTACCCAT AGAAAGCCTA TTCTTTGCGT TGTTTATTGG TTTGGCTAAT
GCCTCTGCGG TGCTGGTCGG GCGCGCTCTG GGCGGCGACA ACCACGACGA AGCTTGGCGG
CTTTACCGGT TTTTTGACCA GCTAACTATT GGCTTGGTGG TAAGTGGCTG TTTGATATTG
TGGTTAATTC GCCCTTGGGT AATAGCCATA TTCGACCAAC TAGACCCTGC TGCCGAAGCT
TTACTGGCGG ATGTACTGGC TGTGTTTAGC CTGCTTATTT GGGTAAAAGT ATTAAACATG
ATGCGCATAA TGGGCGTTTT GCGCGCAGGC GGTGATAACA AGTTTTGCTT GGCGGTGGAT
ATTAGCGCTA TGTGGCTGGT GGGTATTCCC CTTTATGCCG CCGGTGTATT TTTTACCGCT
GTGCCCTTCG CGGCTATTTT TGCGCTTATG TACTTGGAAG AAGCGCTTAA GTTTATTCCG
GTGGTAATGC GTATTCGCAA GCGCTATTGG ATAAAAAACC TCGTTAAAGC CGAGGCCAAA
TAA
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| Protein sequence | MPLSKPLTPK SPTFWKSVLL LALPVALQML LQSLLGMADV VMVGDLGPEA LAAVGLAAKL
HFLLLVMMSG IAAGGSVLIA QYSGSKNSEG CRNTLSVTLA VGVAVIMPLV AAFAIAPQVW
VNWINPDPIV VAIAAEYIQI TALVLLLTQI AVIYEASLRA LGNTTVPLIG GAVSVLVNIA
LNYALIFGHW GFPAMGVAGA AWATLIARAA HMILVVGWVY ATRHSFALGV RDICARVDWP
KVKRYIVFAL PLVANYTLWG VGNATYHVLT GFAGTEALAI MGVIVPIESL FFALFIGLAN
ASAVLVGRAL GGDNHDEAWR LYRFFDQLTI GLVVSGCLIL WLIRPWVIAI FDQLDPAAEA
LLADVLAVFS LLIWVKVLNM MRIMGVLRAG GDNKFCLAVD ISAMWLVGIP LYAAGVFFTA
VPFAAIFALM YLEEALKFIP VVMRIRKRYW IKNLVKAEAK
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