| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0524 |
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| Symbol | |
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| ID | 3968765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 647116 |
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| End bp | 647925 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637919587 |
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| Product | putative integral membrane sensor protein |
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| Protein accession | YP_526000 |
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| Protein GI | 90020173 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3300] MHYT domain (predicted integral membrane sensor domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAAA TGACAGAAAT GCATACGATG GAAGCATCTT ATAATTGGTT TCTTGTTGCA
CTTTCATTTT TTGTAGCTGT TTTTGGTTCG TTTACATCAT TGCAATTAAT GCGCGGTATG
CGCGGTACAG AAGGTGGCGC GAAAATAGCC TGGATTATTT CGGCGGCGTT TGCGCTAGGT
GGTGGTGCTA TTTGGACAAT GCATTTTATT GGAATGATTG CTTACGAAAC AAATATGCCT
GTGGGTTATT CAGCTGGCTT AACGGCGCTC TCGTTGATAA TTGCCGTTGG CGTTGTGGGT
ATTGGTATTT TTCTATTAAG TAAAAGCCAA AACTCCTTGC TGGTATTGCT TGTAGCTGGG
GTAATAACGG GTTTGGGTGT TGCGAGTATG CACTATACCG GTATGGCTGC AATGGTAATG
GCTGCCGATA TGGTATACGA CAATATTTTG TTTGCCGCTT CTATTGTAAT TGCAATTGTT
GCGGCAACGG CTGCGCTGTG GTTGGCGTTC AACCTTGAAG GTAACATGCA AATGTTTGCC
GCGTCGGTTG TAATGGGCGT TGCAGTATGT GGTATGCACT ACACTGGTAT GGCTGCAGTG
ACAATGGTGC CCAATGGCCA AGCAATTGAA ATTGAATCTA CTGTTGCTCC ACTTACTTTG
GGTTTATTTA TTTTCTGCTT CAGTATGTTG TTGTTGGTGT TATCGCTAAT CGTAACTTTA
AGTCAGCTAC AAAAAAGAAT GTACGAAGAG TTTGATGACG ACGATGATGA GGAAGACGAA
GAAGTTGTTA GTCAGCCTAT TAGGAATTAA
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| Protein sequence | MMEMTEMHTM EASYNWFLVA LSFFVAVFGS FTSLQLMRGM RGTEGGAKIA WIISAAFALG
GGAIWTMHFI GMIAYETNMP VGYSAGLTAL SLIIAVGVVG IGIFLLSKSQ NSLLVLLVAG
VITGLGVASM HYTGMAAMVM AADMVYDNIL FAASIVIAIV AATAALWLAF NLEGNMQMFA
ASVVMGVAVC GMHYTGMAAV TMVPNGQAIE IESTVAPLTL GLFIFCFSML LLVLSLIVTL
SQLQKRMYEE FDDDDDEEDE EVVSQPIRN
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