| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0478 |
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| Symbol | |
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| ID | 3967996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 587347 |
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| End bp | 590433 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637919541 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_525954 |
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| Protein GI | 90020127 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3488] Predicted thiol oxidoreductase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAAC AAGCTTATAC AACTACACCA GTTAAACCAA ATGCGTTAGG TTTAGCCATT
CGCACACTGG CCCTTGGTGG CCTAGCTGCG GGACTTGTAA ACGTAGCGCA TGCAGATTTA
TTGTCGGTAA ATAAAACTGC TACGGCCAGC AGTGAAATGC AAGCTGCAGC TTACGCATTC
GATAACAATC AAAATACGCG CTGGGAAAGT GCGCACGCGG TTGATCCAAC CAGCATAAGT
GTAGACTTGG GCGAAACCTA CGATTTAGAT AGCATTGTCG TTCACTGGGA AGCTGCCAAC
GCTGCAAGCT ACACCATAGA GGGCTCCGAT AACGGTGTTA ACTGGACGCA AATAGGCACC
TATACCGGTG GTACCTTTGG CAATAGAACC GATACCGTAA ACGTAGATGG TAATTACCGT
CACGTGCGAT TAAATGGTAC TCAGCGCAGC GATGGCAATG CATGGGGTTA CTCCATATGG
GAGCTGGAAG TTCACGGGAC AGAAGTAACC GAACCACCTG TAGTGGAACC TCCTACAGAG
CCTGGCGAGA ATTTGGCAAT ATATGGCACG GCAACCGCCA GCTCTGGTAA CGCCGATGTA
GCTATTGATA ATAACGCTGG TACGCGCTGG GAGAGTGACC ACGGCATCGA CCCTTCTAGT
TTTACTTTAG ACCTAGGCGC AACCTACAGC TTGAACCAAG TGGTTATAGA TTGGGAGGCC
GCCAACGCCA AGGTGTATGC TATCCAAGGC TCTAACGATG GCACTAACTT TACTACCCTT
GCTAATTACA GCGGCGGTGA ATTCGGCACG CGTACCGATA CATTAAATAT TGCTGGTGAT
TATCGCTATG TACGCCTGTT GGGTACTGAG CGCAGCGATG GCAACGCATG GGGCTATTCT
ATTTGGGAAT TTAAAGTATA TGGCGGTGGA AAAACTGAGC CACCGGTTAC CGAGCCACCT
GTGACAGAAC CGCCAGTGGT AGAGCCCCCC ATTTTTACCG ACCTAAATTA TCAGCCACTG
TTTAACAACA CACACAGCCC AGATACTGCG CAAGAGTGGT ACACCAAGCC CGACGGTACA
GTGGTAACAA TTGCAAGTGG CCGCGCGCGT TCACGTCACG AATCGGAAGA TATTTTTTAC
ACTTTCCCAA CGCATTATTT TGAGCACCGT ACATTTGAAA TAGAAATTCA CGACCATACC
CCTAAGGGCC AAAATTTGGT GGAGGTTTTC TACCACCCAG AATACGCCAA CTATGTGCCG
CCGGGTTGTC GCTCTTCTTA CAGCAATGTT TGGCGTGCAG ACTTTAACAA CAACGCCGGC
ATGGATGAAA AACTGCAAAC CGCCACCCCA GACGGTAAAG GTGAGCGTTG GGTATGCCGC
ATACAGCGCG ACGCGCACAA TGGCGACGAC GGCATTTTAG ATGTGGGTTC ATGGATGGAG
TTTGAATTAC AACAATTCTT AGGCTTATAT GAAGGCGACC CTAATGTGCG TGGCCAGGCC
GTTTACTACA CCGATACATA CCGTTTTAAA TTAGGCCAGC CCGGTATTTA TATTGTGGGC
GATGAAGCCA TGGAGGAAAA AATTCGTGCG GGTGGCCGCG CTACAGCGCC TTATGTAAAA
GGCGGCGACT CGGTACCTGT TAACGAAGTT ATTTCGGTTA ATGGCGACAA CACACTTACC
TACAAAGTAA TGGCAAATGG TAAGTGGACG CAAAAAGATA ACCCCAACGG CACTGTAGTT
ACTTTCCCTA TTCGCGATGG CATTGAGGTA TACGATAACT ACGTAGTGGC GAGTGGCGTG
GCCGATTGGA CCACCTATTT CCGCGAAGCG TTAAATATTC AGTGGGATAC GCACAACGCA
TTTATGCAGG GGCGGCGCGT GTTTCATACG CGTATGGATA CCGGCGTACA CGAAGAAGTG
GGTAACCCAG ACTTTCCCGA ATTGGCAAAT ATTGCCGATG GTTTAATGGT GAAAAATTCG
TGCTTGGGTT GTCATGTAAA CAACGGCCGC GGTATTGCTC CGCAAAACGG CGCGTTATTA
GATACGCTAG TCGTTAAAGT AGGCTCGGGT GCGTTCGATA ACCTTGGCCA GCCACAACCA
CACAGTTATT ACGGTGGTGT ACTGCAAAAC CTATCACTAG ATGCTGCTGT GCCTGCAGAG
GGTTCGGTTC GTGTAACTTA CACCGCGCAA AACGGAACCT TTAACGACGG CACAGGCTAC
AGCTTGCAAG TGCCTACCTA TTCGTTAGAA ATGAACGATA CCAACGGCGG GGCTATTCAG
CATATTTCAC CGCGCATGCC ACAAAACATA ACTGGTTTAG GCTTATTAGA AGCCTTACCC
GAAAATGAAA TTTTGGCATG GCACGACCCA GATGATAGCA ATGGCGATGG TATTTCTGGC
CGCGCTAATG TTGTTACCTC ACCAGAAACG GGGCAACAGT TTATAGGTCG CTTTGGCTGG
AAAGCGTCAT CAGCAAGTTT GCGTGATTTT GCTGCAACGG CTTTAAGTGG CGATATGGGT
GTAAATACCT CTGTGTTACC CAATGCAGAT TGTGGCGCAC AACAAACCGC CTGTATTCAA
AATAGCGGTC AGGGCGTAGA GCTAAGCGAC CTGCGTTTGA ATGAACTGGT GGTTTACTTG
CAAGCGCTGG GCGCGCCTTC GCGCAGGCCA GAAACTGTAG ACCAGCCAAT GGTAGTGGCC
GGTGAGCAGC GTTTTACCGA TATAGGCTGT GCCTCGTGTC ACCGACCAGA AATGAACACC
GGTCATAAGC ACGATTTAGC TGAGTTGCGT GGCAACGTTA TTCGCCCCTA TACCGATATG
CTGTTACACG ATATGGGCCC AGGTTTGGCA GATAGCTTAA CTCAAGCGCC AGAGCTAAAT
CGCGAATGGC GTACAGCGCC GCTGTGGGGC TTGGGCATGA ACTTGGCTGT AAACGGTCAC
GACAACTTGC TCCACGATGG TCGCGCACGC AGTATTGAAG AAGCCATTTT ATGGCACGGT
GGGGAAGCGC AAGCCAGTAA TAATGCCTAT AAAGCACTAA GTGCGCAGCA GCGAGCAGAG
TTAATAGCGT TTTTACGCTC ACTCTAA
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| Protein sequence | MKKQAYTTTP VKPNALGLAI RTLALGGLAA GLVNVAHADL LSVNKTATAS SEMQAAAYAF
DNNQNTRWES AHAVDPTSIS VDLGETYDLD SIVVHWEAAN AASYTIEGSD NGVNWTQIGT
YTGGTFGNRT DTVNVDGNYR HVRLNGTQRS DGNAWGYSIW ELEVHGTEVT EPPVVEPPTE
PGENLAIYGT ATASSGNADV AIDNNAGTRW ESDHGIDPSS FTLDLGATYS LNQVVIDWEA
ANAKVYAIQG SNDGTNFTTL ANYSGGEFGT RTDTLNIAGD YRYVRLLGTE RSDGNAWGYS
IWEFKVYGGG KTEPPVTEPP VTEPPVVEPP IFTDLNYQPL FNNTHSPDTA QEWYTKPDGT
VVTIASGRAR SRHESEDIFY TFPTHYFEHR TFEIEIHDHT PKGQNLVEVF YHPEYANYVP
PGCRSSYSNV WRADFNNNAG MDEKLQTATP DGKGERWVCR IQRDAHNGDD GILDVGSWME
FELQQFLGLY EGDPNVRGQA VYYTDTYRFK LGQPGIYIVG DEAMEEKIRA GGRATAPYVK
GGDSVPVNEV ISVNGDNTLT YKVMANGKWT QKDNPNGTVV TFPIRDGIEV YDNYVVASGV
ADWTTYFREA LNIQWDTHNA FMQGRRVFHT RMDTGVHEEV GNPDFPELAN IADGLMVKNS
CLGCHVNNGR GIAPQNGALL DTLVVKVGSG AFDNLGQPQP HSYYGGVLQN LSLDAAVPAE
GSVRVTYTAQ NGTFNDGTGY SLQVPTYSLE MNDTNGGAIQ HISPRMPQNI TGLGLLEALP
ENEILAWHDP DDSNGDGISG RANVVTSPET GQQFIGRFGW KASSASLRDF AATALSGDMG
VNTSVLPNAD CGAQQTACIQ NSGQGVELSD LRLNELVVYL QALGAPSRRP ETVDQPMVVA
GEQRFTDIGC ASCHRPEMNT GHKHDLAELR GNVIRPYTDM LLHDMGPGLA DSLTQAPELN
REWRTAPLWG LGMNLAVNGH DNLLHDGRAR SIEEAILWHG GEAQASNNAY KALSAQQRAE
LIAFLRSL
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