Gene Sde_0444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0444 
Symbol 
ID3964872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp546414 
End bp547403 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content38% 
IMG OID637919507 
Producthypothetical protein 
Protein accessionYP_525920 
Protein GI90020093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCAC GAGCAAGGTC AATGCTTGAT AAATCAATTG CGGCAATGCT CTCTGCAATT 
GAAATATATA ATAAGCCTGA CTTTAACTAT CGGGAAGAGA CATTCTCGGT GCTTTGTATT
AATGCATGGG AGTTGCTACT GAAAGCTAAG GTTCTTCAGC TTGCTAGAAA CCAAGTTACA
AGTTTGTACG TCTGGGAATA CCGAGAATTA AAGGCTGGCG GAAAGTCCAA GAAAAAATAT
ATAAAAAATA ATCGCGCTGG AAATCCGATG TCAGTAAGCC TCTTTGAAGC TCACAGAATA
ATTACAGAAG AGTACGGCGT AAAAATAAAC AATGCGGTAA AAACTAATAT AGCTACCCTT
GCGGAGATAC GTGACAACTC AATACATTTC ATTAATGACG ACCTTTCTTT ATCTATTAAG
GTTCAGGAAA TCGGTACTGC TTCATTACAA AATTATTTGC ATTTGGTGCA AGAGTGGTTT
GGTCCCGTTT TAGATAAATA CAACTTTTAT CTTATGCCCA TGGCATTCTT TAGGGGATTT
GATTCTGTAA ATGGTGAAAC CCTTAATGCA TCGGAGAAAA ACCTCTTAAA GTATATTAAA
TCTGTAGAAA AAGAGTACGA CAATGAGGCG CTTTCTGATT ACAACTTGTC GCTGAGAATT
GATGTAAACT TCAAAAAAGT TAAAAGCGGA TCAGGTATCC CCGTTCAAAT AACTAATGAT
GCAAAAGCCC CTGTCGTGAG GCTTGCAGAA GAAGAGATAA TGGATAAGTA CCCATGGGAT
TACGACGTTT TAACAACCCG ACTGAAAAAG CGTTATTCGG ATTTTAAGGC AAACGCCGAG
TACCATTCAA TTCGAAAATC CCATGAGAAC AATGAAAAGT ATTGCCACCA ACGGTTATAT
AATCCATCAA ACCCAAATAG TGGAAGCAAG GCGTACTTTA ACCCTAATAT ACTGAAAGAA
TTTGACAAGC ATTATACAAA GCAAAGCTAA
 
Protein sequence
MKSRARSMLD KSIAAMLSAI EIYNKPDFNY REETFSVLCI NAWELLLKAK VLQLARNQVT 
SLYVWEYREL KAGGKSKKKY IKNNRAGNPM SVSLFEAHRI ITEEYGVKIN NAVKTNIATL
AEIRDNSIHF INDDLSLSIK VQEIGTASLQ NYLHLVQEWF GPVLDKYNFY LMPMAFFRGF
DSVNGETLNA SEKNLLKYIK SVEKEYDNEA LSDYNLSLRI DVNFKKVKSG SGIPVQITND
AKAPVVRLAE EEIMDKYPWD YDVLTTRLKK RYSDFKANAE YHSIRKSHEN NEKYCHQRLY
NPSNPNSGSK AYFNPNILKE FDKHYTKQS