Gene Sde_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0415 
Symbol 
ID3965991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp512205 
End bp512765 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content45% 
IMG OID637919478 
Producthypothetical protein 
Protein accessionYP_525891 
Protein GI90020064 
COG category[S] Function unknown 
COG ID[COG3152] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAA CTCTTAACCC CTATCAGGCC CCACAGGGTG ACCTAGATAC AGGCGTATTT 
GCCGAAGGCG AAGTAGCTCT TTTTAAAGCA AGTACACGTA TTGGCCGTTT GCGCTATTTA
TCTCGCGCTT GCACTTTTGG CATACTCAGT TACTTAGCAC TTGGTATTAC TGCGGGAATA
GCTGCTGCTA TAGGCGGGGT AATCGGCGCA GTTTTCTGGC TATTATTTGC CGCAATAGTA
ATTGGCGTTT TCGCGGTAAG TATTATATTT GGCATACAGC GTTTGCACGA TCTGAACCAA
TCTGGCTGGC TTATTTTATT AAACTTCATA CCAATCGCTA ACTTGGTAAT GATGATATTT
CTTATATTTG TACCCGGCAC ACAGGGCGTA AATAAATGGG GGCATAAACC GCCCGCTAAC
ACCACCAAAC ACTGGGTAGG CGCATTACTT CCGTTTATTG GCATGTTCGT AATAGGCATT
CTTGCAGCAA TCTCAATCCC CGCGTACCAA GACTACATAG AGCGTTCGCA ATCACAAGAA
ACAATAGACT GGTCCGAATA A
 
Protein sequence
MTETLNPYQA PQGDLDTGVF AEGEVALFKA STRIGRLRYL SRACTFGILS YLALGITAGI 
AAAIGGVIGA VFWLLFAAIV IGVFAVSIIF GIQRLHDLNQ SGWLILLNFI PIANLVMMIF
LIFVPGTQGV NKWGHKPPAN TTKHWVGALL PFIGMFVIGI LAAISIPAYQ DYIERSQSQE
TIDWSE