Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0409 |
Symbol | |
ID | 3965985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 504772 |
End bp | 505467 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637919472 |
Product | RDD |
Protein accession | YP_525885 |
Protein GI | 90020058 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCACCG ACACCCGAAT AGCCCTAGAG ATTCCCGAGG GCGGCGACTT GCCACTTGAC CCTGCAGGGT TCGGCCCGCG CGCCGTGGCT TATATCATCG ATTTCTTAAT AACTACCGTG GCTTTGAGTA TTTTAGGTGC GGTGCTCGGC TTGGCGGGTG GTTTTGGCGA CGGCATTCTT TATATTCTTT ACTTTCTTGT TAATTGGTTT TACCCAGTAT TTTTTGAAGT GTGGAAAAAC GGCGCCACGC CGGGTAAACG CAGCATGGGG TTAGTGGTAG TCAACGACGA TGGTACGCCG CTTACTTTCT CTGCCTCGGT AATCCGCAAC TTAATGCGCC CAGTTGATAT GCTGCCGGTA GGCTATATGA CCGGCGTAGT AAGCATACTG TGCACTCGCA AGTTTCAGCG TTTGGGCGAC TTAGCCGCCG GTACCATGGT GGTTTACGCC CATCAACCTA CACCCGCCCC AGTATTAGAT GCCAAAGGTA AGCGCCCTGT ACCTGTTAGC CTGCGCACCG ATGAGCAGCG CGCGCTATTG GCGTTTGCCG AGCGCAGCAA AAGTCTATCG GCCCAGCGCC AACAGGAGCT TGCCGAACTG CTGCAGCCCA TCATTAAAGC CGACGAGCCA GTGCTTGCTA TTAAACAAAT GGCCAACAGT ATGGTAGGCG ATTTTAGCGG GGGGCAAAAC CGATGA
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Protein sequence | MITDTRIALE IPEGGDLPLD PAGFGPRAVA YIIDFLITTV ALSILGAVLG LAGGFGDGIL YILYFLVNWF YPVFFEVWKN GATPGKRSMG LVVVNDDGTP LTFSASVIRN LMRPVDMLPV GYMTGVVSIL CTRKFQRLGD LAAGTMVVYA HQPTPAPVLD AKGKRPVPVS LRTDEQRALL AFAERSKSLS AQRQQELAEL LQPIIKADEP VLAIKQMANS MVGDFSGGQN R
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