Gene Sde_0381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0381 
Symbol 
ID3967628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp469105 
End bp470136 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content45% 
IMG OID637919444 
Producthypothetical protein 
Protein accessionYP_525857 
Protein GI90020030 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAA CACAAACTGC ACAGGCGCCA ATTGATGCGG TGATTACATG GGTGGATGGC 
TCCGACCCTA AGCATGCGGC TAAACTAGAA GGCTATTTAG CCAGCATAGG TGGTTCGCGC
CCGCGCGCTG CTTCGCCTTC GCGGTTCCAT CACTCTGGCG AGCTGGATTA TTGCGTTACG
TCGCTGCTTC GCTTTGCGCC TTGGTTGCGT ACTATTTACA TTGTTACCGA TGAACAAACC
CCCGATTTAA TACACAAGCT AAAGGGCACG GTGTATGAAG ATAGGGTGAA GGTTGTAGAT
CACAAGGTGA TTTTTACAGG GTTTGAGCAG CATTTACCCT GTTTTAATAG TAGGCCTATA
TTAAGCGTAT TGTGGCGCAT ACCTGGGTTG GCAGAAAACT TTATATTCTT AAATGATGAC
TTCGCACTGC TGAGACCGGT ACGAGAGAGG GACTTTTTCC GCGATAATAA AGTGGTATTG
CGTGGTAAAT GGCGCAAGTT TTCCGATAAG GTTATTCATA AAAAAGTGGC GCACTTTTTA
GAGGGATTGT TCTCTAAGAA AAAGCGCGAG CTTCGGAAAA CCAAGGTGGG CTATTTGGCC
GCACAAGAAG TAAGTGCGAA ATTGCTGGGT TTTAAAAATT GGTATTTCCA AATACCGCAT
AACCCTCACG CGTGGCGAGT ATCTACTCAG CGCACTTATT TTGAAGCTAA CCCTGAAGTG
CTGGAGTTTA ATGTAAGCTT CCCTTTGCGC AATAGCGAAC AATTTATTGG CGAGTCCTTA
GCTGCGCATT TAGAGCTAAA AAATAAAGGC GCTAAAATTA AAAATGATTT AAACGTACTC
CAACTAAAAC CCGCCGACCA AGCGCTGCTG CGCATTAAAA ACAAACTAAA CCGCGCCGAC
AAATCCAAAA AAACCGCATT TGTATGCGTA CAAAACATAG AAAACGCGGA CGAAGAAAAG
CAAAAGCTTA TATTCGAGTG GCTGGATAAG CGAATAGGGA CTGTGGATGA ATTGCTAAAC
GCGAATCGCT AA
 
Protein sequence
MTATQTAQAP IDAVITWVDG SDPKHAAKLE GYLASIGGSR PRAASPSRFH HSGELDYCVT 
SLLRFAPWLR TIYIVTDEQT PDLIHKLKGT VYEDRVKVVD HKVIFTGFEQ HLPCFNSRPI
LSVLWRIPGL AENFIFLNDD FALLRPVRER DFFRDNKVVL RGKWRKFSDK VIHKKVAHFL
EGLFSKKKRE LRKTKVGYLA AQEVSAKLLG FKNWYFQIPH NPHAWRVSTQ RTYFEANPEV
LEFNVSFPLR NSEQFIGESL AAHLELKNKG AKIKNDLNVL QLKPADQALL RIKNKLNRAD
KSKKTAFVCV QNIENADEEK QKLIFEWLDK RIGTVDELLN ANR