| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0376 |
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| Symbol | |
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| ID | 3967623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 464145 |
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| End bp | 466628 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637919439 |
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| Product | cis/trans isomerase |
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| Protein accession | YP_525852 |
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| Protein GI | 90020025 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.799569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAGAA ATAAAACTAG CGTCTTATTT ATCGCACTTG CCTTAACTGC AATGGTAGCA
GGGCTAAGCT ATTACTATAT TCAAGAACAA AGGGAAGAAC CCGCGTTTAC TGTACTACCT
CACAACACTG TGCACGAAGA AGTTAATTAT TACAGCGACA TTCAACCAAT ATTGGATAAA
AAGTGCGTGG CGTGCCATAG CTGCTTTGAT GCGCCATGCC AACTAAAACT TGTAAATGCG
AAAGGGTTAC TGCGCGGCGC TACTGCCAAG CAGGTATATA ACGGCGGCCG CACCGAACCA
CAACAACCCA CCCGCCTTAA TTTGGATGGT AATACCGAAG CCGAGTGGCG CAACCTCGGT
TTTCACTCGG TACTAGAAAC AAACAACCAA AGCCCACTAC TAAAATCGTT TATTGCTTGG
GGCTTCGCTA CACAAAATAG TGAGAACGCA AACACTCTTA ACGAAGCCAT TAAAAAAAAC
AATATTGAAC TGGGAACAAC CAGAGAAAAC CAATGCAGCG CTACAATCGA AGAGTTTAAT
AGGTTCACCC ACAGCCACCC TCATAACGGT ATGCCACTGG CCACCCAAGG GCTATCTCAG
TCGGAATACG ATTTAGTTAT GACCTGGTTT GAACAAGGCG CGACCATCCC TGACGCGCCT
TGGACAATCA ATAAGCAAGA CAAAGAAGTG ATACAAAAAT GGGAAGACTG GTTAAACGAA
ACATCGAATG AAAGAAAGCT ATTAGCACGC TATATTTACG AGCATCTTTT TCTCGCGCAC
TTGCACTTAC AGCCAGATGA TAATCTTTCA GAGAGAATTC TCGATAGCGA ATTACAATAC
CCCGTCAATT TCTATCGTTT AGTACGGTCA AGTACGCCAT CAGGAACGGC TATCATTCCA
ATCAACACAG CTTTACCAAA TCAACCTACT CAATCGGATT TTTACTATCG CTTGCAACCT
GTGGAAGAAA CCATTGTATA TAAATCTCAC ATACCCTATC GGTTTGATAA AAATAGATTA
ACGGAAATTG AATCTTTGTT CGCAAGCGAA AGCTGGCAAG TAAAAAACTT ACCTAGCTAT
GAGTACGAAT TTAGATCTAA TCCATTTAAA ACTTACAGCG CGATACCAGC CAAGCTTCGC
TATAAGTTTT TATTGCAGGA TGCAGAATAT TTTGTTCGTA CATTTATTCG AGGCCCGGTG
TGCCACGGCC CTATCGCAAC CGATGTTATT CGAGACCACT TTTGGGTAAT GTTTGAAAAC
CCTGAAACAG AGCTATTCGT TAACAACAAA AATTATCGCC AATCCGTTGA AAGCTTACTT
GGGCTACCGG GAGAAAATAG CCAGCTTTCT GAGTTCGGTG ACGAATGGAC AATCTATCAA
AACAACCGCA ATAAATATGC AGAAGACCGC AATACAGCTT ATCGCGAAAG TTACAATACT
GGCAGACCAC TAAATACAAT TTGGACAGAA AAAGGCGAAA ACCCCAATGC CTTTCTTACC
GTATTTAGGC ACCACAACAA TGCTACGGTA CTGCAGGGCT GGCAAGGCAG TAAACCACGC
ACCGCATGGG TATTAGACTA CCCCTTATTC GAACGTACCT ACTATGAACT TGTTGCAGGT
TTTGATGTTT TCGGCAACGT GTCACATCAG TTACAAACAC GTTTGTATTT TGATTTAATT
CGCCATGGCG GTGAAACTAA CTTTCTAGCC TATATGCCCA AAGACTCCAG AGAAGCAATA
TTTAACCATT GGTACCAAGG GCTAGCCCAG TTAAAAACAA GTATCTCTTA CCCTAAACTA
GACACCTTAG CACTGGGTGC TCCAGAGCTA AATGAGAGCG CTCCTAAAGA CGCCTTTTTT
AACTACTTCT TTGACAAATT CCCAAGCTCC ACCAATGCGC ACGACCCGAT AAATCGTGCA
GAATCTAGTA CAACAAATAC AGACGATGGA AAAGAGCAAG CGCATACGCA AAACTTGGTA
GCAACCCAGC TAGCCTCTAT AGCTAGCAAA CCCGCTAAAG AACTCGCATT TATAAAAGAT
TTACCCGATC TTAGCTTACT TTTTATTACG TCCAACAATG CCACGTCCAG CAATGCCATT
TCCAACAATA GTACTTCAAG CAATGAAAAT CAAAGCATTG TTTATTCACT AGTGCGCAAC
AGAATGCATA GCAATGTTGC ATTTCTTACC GGCGAGGAAC TTAGGTACCA ACCAGAACAA
GATTATTTAT CAATTCGAAA AGGCCTTGTG GGTAGCTACC CCAACCTTAT ATTTAAGGTC
GATGAAAGTG ATATAAATCG CTTCATAGGC GCGTTGAATA CGCCAGATAA CGATACCGAA
TTTAGAGAAC GCATGGATGA ATTTATTTTA AAACGTTTAG ACGACAATTT TTGGCAAACT
GTACATGCGA TAAGTAATTC CGAAAAAAAC AGAAACCCAA TTTCTAGCGG ACTACTAGAC
TTGAATCGTT ATGAATGCTG GTAA
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| Protein sequence | MLRNKTSVLF IALALTAMVA GLSYYYIQEQ REEPAFTVLP HNTVHEEVNY YSDIQPILDK
KCVACHSCFD APCQLKLVNA KGLLRGATAK QVYNGGRTEP QQPTRLNLDG NTEAEWRNLG
FHSVLETNNQ SPLLKSFIAW GFATQNSENA NTLNEAIKKN NIELGTTREN QCSATIEEFN
RFTHSHPHNG MPLATQGLSQ SEYDLVMTWF EQGATIPDAP WTINKQDKEV IQKWEDWLNE
TSNERKLLAR YIYEHLFLAH LHLQPDDNLS ERILDSELQY PVNFYRLVRS STPSGTAIIP
INTALPNQPT QSDFYYRLQP VEETIVYKSH IPYRFDKNRL TEIESLFASE SWQVKNLPSY
EYEFRSNPFK TYSAIPAKLR YKFLLQDAEY FVRTFIRGPV CHGPIATDVI RDHFWVMFEN
PETELFVNNK NYRQSVESLL GLPGENSQLS EFGDEWTIYQ NNRNKYAEDR NTAYRESYNT
GRPLNTIWTE KGENPNAFLT VFRHHNNATV LQGWQGSKPR TAWVLDYPLF ERTYYELVAG
FDVFGNVSHQ LQTRLYFDLI RHGGETNFLA YMPKDSREAI FNHWYQGLAQ LKTSISYPKL
DTLALGAPEL NESAPKDAFF NYFFDKFPSS TNAHDPINRA ESSTTNTDDG KEQAHTQNLV
ATQLASIASK PAKELAFIKD LPDLSLLFIT SNNATSSNAI SNNSTSSNEN QSIVYSLVRN
RMHSNVAFLT GEELRYQPEQ DYLSIRKGLV GSYPNLIFKV DESDINRFIG ALNTPDNDTE
FRERMDEFIL KRLDDNFWQT VHAISNSEKN RNPISSGLLD LNRYECW
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