| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0364 |
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| Symbol | |
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| ID | 3967611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 450196 |
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| End bp | 451974 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637919427 |
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| Product | putative secretion pathway ATPase |
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| Protein accession | YP_525840 |
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| Protein GI | 90020013 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTA AATTATCTGT CGACCGCGTA TTAGATTTGC GATCCACACT GTTGGATCTT
GTAACCGATG GCATTGTTAA GCAAGAAGAT GCCAATGTGT TAATGGGGGC ACATCGTACG
CGCGAACAAA CTGCCATGCA CCCCTTGGTG TACCTTAGCA CGCAGCAGTT GGCCGATCAG
AAAAACCACG AAAAAGTTGT GGATGAAATG CGCCTCACTG CGTGGCTGGC CGATAAAGCC
GAGCTGATGA TTTACCACAT AGACCCAATG AAAGTGCCGG TAGCGGATGT AACCGAGGTG
ATGTCCTACC AGTTTGCCAA GCGCCACGGC TTGCTGTGCG TAGATGTAAA AGCCGACTAT
GTAGTCATTG CAGTAACCCA ACCATTTGCC AACGAGTGGA TAGAGCAGTT GCAGCAGCTA
GTGCGCCGCG ATATCCGCCG CGTTATTGCC TTGCCCTCGG ATGTCGAGCG TTATCGGGTA
GAGTTTTATT CGTTGGCGCG CTCTATATCG GGCGCTCAAA CCGGTGCCAG CCAAGGTCGC
GGCAGCGGCA TTGCCAATTT TGAGCATTTG TTGGAGCTGG GCACACTCAA AGACCCAGAA
GCTAACGATC AGCACATTGT GAATATTGTA GATTGGCTAC TGCAATACGC GTTTGATCAG
CGCGCCAGCG ATATTCATAT TGAGCCGCGC CGCGAAATAA CCCGCATGCG TTTTCGCATA
GACGGGGTGC TGCACAATAT TTACGAATTC CCTGCCTCGG TGGCAACGGC GATTGTGAGT
CGTATTAAAA TTCTTAGCCG CATGAATGTG GCCGAAAAGC GCAAGCCGCA AGATGGCCGA
ATTAAAACCA AGCGCCCAGA TGGCAGCGAA GCCGAGTTGC GGCTATCTAC CATGCCTACC
GCGTTTGGCG AAAAATTGGT TATGCGTATT TTCGACCCAG AAGTATTGCT GCGCAGCTTT
GAAGACTTGG GCCTAGGGGG CGACGACTAC AAACGCTGGT CTGAAATGAT TAATAAGCCG
CACGGCATTG TGCTGGTAAC TGGGCCTACC GGCTCGGGTA AAACCACCAC GTTATATTCA
TCGTTGCGTC AGTTGGCAAC CGACGAAGTG AATGTGTCTA CCATTGAAGA CCCAATAGAA
ATGGTGGAGG ACGCGTTTAA TCAAACGCAA GTGCAGCACA ATATAGGTTT AGATTTTGCT
GCGGGCATTC GCACACTTAT GCGACAAGAC CCCGACATAA TTATGGTAGG TGAGATTCGC
GATTTAGAAA CCGCGCAAAT GGCTGTTCAG GCTGCGCTCA CCGGCCACTT GGTAATATCC
ACATTGCACA CCAACGACGC GCCAACGGCC ATGACGCGAC TGCTAGATTT AGGCGTGCCG
AGTTATTTGT TGCGCGCCAC ATTAATTGGC GTAATGGCGC AGCGCTTAGT GCGCACGCTG
TGCCCGCATT GCAAAAAAGA ATCGACCATT TCCAACGAAG ATTGGGAAGG CATGGTTAAA
CCTTGGAAAG TCGCCAAGCC CACTAAAACG TTTGAGCCAG AAGGCTGTTT AGAGTGCCGC
AATACCGGCT ACCTTGGCCG CCAAGGCATT TACGAAATAT TGGGTATGTC GGAATCGGTG
CAGCAATTGG TAGGAGATCA TTGCGATCTT GCCATATTGC GCCAGCAAGC TATGCGCGAA
GGCATGCGCA CACTGCGGCT TTCGGGCGCG CAAAAAGTTG CGCAGGGCAT GACAACCGTG
GCAGAAGTAC TGCGCGTAGC ACCACCGCCG GAAAAATAA
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| Protein sequence | MSAKLSVDRV LDLRSTLLDL VTDGIVKQED ANVLMGAHRT REQTAMHPLV YLSTQQLADQ
KNHEKVVDEM RLTAWLADKA ELMIYHIDPM KVPVADVTEV MSYQFAKRHG LLCVDVKADY
VVIAVTQPFA NEWIEQLQQL VRRDIRRVIA LPSDVERYRV EFYSLARSIS GAQTGASQGR
GSGIANFEHL LELGTLKDPE ANDQHIVNIV DWLLQYAFDQ RASDIHIEPR REITRMRFRI
DGVLHNIYEF PASVATAIVS RIKILSRMNV AEKRKPQDGR IKTKRPDGSE AELRLSTMPT
AFGEKLVMRI FDPEVLLRSF EDLGLGGDDY KRWSEMINKP HGIVLVTGPT GSGKTTTLYS
SLRQLATDEV NVSTIEDPIE MVEDAFNQTQ VQHNIGLDFA AGIRTLMRQD PDIIMVGEIR
DLETAQMAVQ AALTGHLVIS TLHTNDAPTA MTRLLDLGVP SYLLRATLIG VMAQRLVRTL
CPHCKKESTI SNEDWEGMVK PWKVAKPTKT FEPEGCLECR NTGYLGRQGI YEILGMSESV
QQLVGDHCDL AILRQQAMRE GMRTLRLSGA QKVAQGMTTV AEVLRVAPPP EK
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