| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0357 |
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| Symbol | |
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| ID | 3964823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 440614 |
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| End bp | 441954 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637919420 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_525833 |
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| Protein GI | 90020006 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.302705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.695639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGTTG CGGCCGGCCT TGTACTGCCC TCTGCAGTTG AAAAAGCAGT AAGCGAGCTG
GGTTACTCTG TAACGCTTGG CTCTGCCGCT ATGGCACAGG AAGATACTCG CCAACCGCGT
AGGCTTCCTG GTCTTGCTCT TAAATTCACC GAAGATATGG CCAAGGTTGA AGAGTTTATC
AACCCGCCAG ACCCAGAAGA CGGCAAGCCT GCGGCTAAGC AAGATCTACC CGCTGCCGAA
AAACTTCTCA ACTCTATGGA GAAGAAGTGT AAAGATAAGT GTAACGGCTA CGAAATGGCC
AACATTTATA ACTTTATGGC TTACTTGGCT TACGAACGTG AAGACATGAA AAAGACTGCT
TTCTACTACG AAAAAGTAGT AGAGCAAGCT CCAGAGATTC CATGGGGTTT GGAAGAGCAG
ACTTTGCTGT ACTTGGCCAA ATTGTACGCG GGTGAAGAAA ACTACAAAAA AGCGATCCAT
TACATGGACC GTTACATGAA TACTGTAGTT TCACCTAATG CCGATGCTTT CTACACCAAA
TCAACCATTT GTTATCAAAT GAGTGATTAC GACTGCTCAC TTAAAAACGT GAATACAGCG
GTTGAGATGA TAGAAAAAGC AGGCTTTGTT GCTAAAGAGC AATGGTACAA CCTGCAGCGC
GGTATTAATA ACGAGCGCGA AGATTACAAG CAAAGCTTAA AGTCTAATAT CAAGCTAGTT
AAAAACTATC CTAAGAAGTC CTATTGGAAC GATATGGCGA GTTTTTACAG CCTGCTTGAA
GATAACGACA AAGCCCTTGC TGTAATGGAT GCTGGTTTTA TTGGTGGTAC TTTAACCAAA
GAAAAACAAT ACCTCCAGTT AGCTCAATTC CTTTACCAAG CCGATGCGCC ATACAATGCG
GCTATGGTTA TTCATAAAGG GATGAAAGCA AACGCCATTG AGCAAACTGA AGCTAACTTG
GAAAAAGCCG GTCGCTACTT CCTATTGGCA AAAGAATACA AAATGGCCAT TGATTACCTA
ACGCGTGCGG GTGACAAATC TGATAAGGGC GATATCTACA GCGATGTAGT GGGTATATAC
CTCGCCGTTG AAGATTTGAA AGGCGCGATT GCAATGGGTA AAAAAGCGCT TGATAAAAAA
GGCGGCTTGA AAAAGCCTGG TCGTTTGCAC TACAACATGG GCTCTGCCTA TTTTGAAATG
AAGCAATTCG ACGCCGCACT TAAATCCTTG CAGAAAGCGA CTGAAGATCG CGAAACCAAA
AAGTTGGCTG AGCAATGGAT TAAGTACGTA GAAAATGAAA AAGATCGTTA CGAGCGTTTA
GCTGAGTTTT ACGATAAGTA A
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| Protein sequence | MLVAAGLVLP SAVEKAVSEL GYSVTLGSAA MAQEDTRQPR RLPGLALKFT EDMAKVEEFI
NPPDPEDGKP AAKQDLPAAE KLLNSMEKKC KDKCNGYEMA NIYNFMAYLA YEREDMKKTA
FYYEKVVEQA PEIPWGLEEQ TLLYLAKLYA GEENYKKAIH YMDRYMNTVV SPNADAFYTK
STICYQMSDY DCSLKNVNTA VEMIEKAGFV AKEQWYNLQR GINNEREDYK QSLKSNIKLV
KNYPKKSYWN DMASFYSLLE DNDKALAVMD AGFIGGTLTK EKQYLQLAQF LYQADAPYNA
AMVIHKGMKA NAIEQTEANL EKAGRYFLLA KEYKMAIDYL TRAGDKSDKG DIYSDVVGIY
LAVEDLKGAI AMGKKALDKK GGLKKPGRLH YNMGSAYFEM KQFDAALKSL QKATEDRETK
KLAEQWIKYV ENEKDRYERL AEFYDK
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