| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0331 |
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| Symbol | |
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| ID | 3966511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 414273 |
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| End bp | 415505 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919393 |
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| Product | hypothetical protein |
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| Protein accession | YP_525807 |
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| Protein GI | 90019980 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1690] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03073] release factor H-coupled RctB family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0728371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACAG TAATAAACGA AGTGCCGCTG CACGGCGAAT GTAGTGACGA AAGTGGCAGC
GTATGTAAGG TTCGTTACAT TTCATCTAGT AAAAACTGGA TGGAAAGCGA AGCACTTCAA
CAATTAACCA AAACCAGCCA ACTGCAAGGC ATGCGCTTTG CTGTAGGTAT GCCAGATTTA
CACCCGGGCA GAGGTAACCC AATAGGTGCG GCGTTTGTAA CCCAAGGCTG CATATATCCA
CACTTGGTGG GTAGCGATAT TGGTTGCGGT ATGGGTTTAT GGCAATTAGA TGTAAAACCC
AAGCAAATAA AAATAGATGC TTGGGAGAAA CGCTTAATAG GCTTAGACGA CCCCTACCAA
GGCGAAATCA GTGATGCTAT AGCCAACATA AACTTAAATG CATTAAGCGT AGATGCAGGG
TTGCATAACT TGGGCACAAT TGGTGGCGGC AACCACTTTG CAGAGTTTCA AAAAGTAGAG
CGTGTGTTTT GCCAAGATAG TTTTAATGCA TTGGCGTTAA AAAGCCAATC GGCATTTTTA
CTTGTGCATT CCGGTTCGCG CGGCGTAGGG CAAAGCATTC TTAATAAATA TGTGGCAGAA
AGTGGCGTAA GCAAAGTAGA TGTTGGTACC CAACAATTTA CTAGCTACTT GGCGGCACAT
AACGCAGCGC TTAGTTGGGC AGAAGCAAAC CGACAGTTAA TTGCAAAACG ATTTATGGAT
TGCATTAAAA CTACCGGCAA ACAGGTATTA GATGTTAACC ACAATACCGT TACGCCATTA
ACGGCTCCGC AAGCCTTGCA GCTGGCACAA CTTCTAGGCA ACAAAGCCTG CGCCGCCGAG
TATTGGATTC ATAGAAAAGG CGCAAGCCCA ACGCATTTAG GGCCAGTAGT TATTCCCGGC
TCTAGGGGCA GCCTAAGTTA TTTGGTGCAA CCGCTACAGC AAAATAGCCA GCACCTTGTT
AATGCAGGCT TTTCTCTAGC GCACGGTGCG GGCCGCAAAT GGAAGCGAAG TGACGTAAGG
GGGCGTTTAG AAAATAAATA CAAAGTGGCA GATTTAGAAA ACACGCCCCT AGGTAGCCGC
ATTGTGTGTA AGCAGCGCGA TTTACTGTAT GAAGAGGCAC CGCAAGCCTA CAAAAATATT
CACGTAGTAA TAGACGACCT AGTGCAAGCG GGTGTAGTTA AAATAATTGC CACCTTAAAG
CCCCTGCTTA CCTATAAAAC AAGGCGGAAA TAA
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| Protein sequence | MGTVINEVPL HGECSDESGS VCKVRYISSS KNWMESEALQ QLTKTSQLQG MRFAVGMPDL
HPGRGNPIGA AFVTQGCIYP HLVGSDIGCG MGLWQLDVKP KQIKIDAWEK RLIGLDDPYQ
GEISDAIANI NLNALSVDAG LHNLGTIGGG NHFAEFQKVE RVFCQDSFNA LALKSQSAFL
LVHSGSRGVG QSILNKYVAE SGVSKVDVGT QQFTSYLAAH NAALSWAEAN RQLIAKRFMD
CIKTTGKQVL DVNHNTVTPL TAPQALQLAQ LLGNKACAAE YWIHRKGASP THLGPVVIPG
SRGSLSYLVQ PLQQNSQHLV NAGFSLAHGA GRKWKRSDVR GRLENKYKVA DLENTPLGSR
IVCKQRDLLY EEAPQAYKNI HVVIDDLVQA GVVKIIATLK PLLTYKTRRK
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