Gene Sde_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0316 
Symbol 
ID3968584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp391275 
End bp393347 
Gene Length2073 bp 
Protein Length690 aa 
Translation table11 
GC content47% 
IMG OID637919378 
Productprolipoprotein diacylglyceryl transferase 
Protein accessionYP_525792 
Protein GI90019965 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.833973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.505044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTAGCG ACGTTAAAAA CAAGGCTAAC GAAAGCCAGC AAAATCAATC GCGCTACCAG 
CAAGTAAAGC AAATTTTAGA TAAAGCCTAT GCTGCACAGG CTATCCCTAG CTATCAGGGT
TTAGGCGCAT TTTGGAATAC GCTCACCTAT AGCGATTTTA TGCAATTTAA GTTATACGGC
GAAAAGCTAA TTGCAGATAA ACCTCAAAAA AGTTGCTGCG GTGCCGAGCC AAAAACTACC
CGCGCGCAGG CTTCGGGGCT TATTAAAGGC TTGCGCGGCG AGTTTCCGTT TAACGGCGAG
CAATTTCCGG CCTTGCCTTG GGCTACCAAC GCGTTAACTG AAAGCGATAT TCAATTTATA
GAAAGTTGGA TAAATGATGA TTGCCCAGAA CAAGATGGCG TACTGTTAGC GGAAGCCAGT
AAAAAAGAGG CTACTGCAGT TGTCGACCCG CTAAATTTAG CGCCATCGCT TAGCAATAGT
GGAAATATCA ACGCCTTTAA ACGCAGTAAT AATGAACCTA AGCAGCGCAA AAATGCGGAC
CATCTCACCG ATGAAGAAAT ATGTAAGCTG CGTGAAGCCT TCCGTTGGGC GCGCAGTTTA
AATGCATGGC CAAGAGACAG GCGCAGCCTA AACTCCTGGG GTAAGTTGCA CGGCGATGTG
TGCGCGCACG GGTTCGAACA GTTTCTTACA TGGCATCGTA TGTTTTTGTA CGATTTTGAA
AAAAACCTAC AAGACTTCGA CCCAGATGTA ACCTTGCCCT TTTGGGATTG GACAAGCCCA
GAGTACGATG AAAACAGAGA TAAATCCAAA CCCAGTAACG GCGGTATTAT TCCAAAAATA
TTTCGCTGCT TTATTACCGA GCAAGCCATT GCCGAATTGG TAGACGAATA CCACCTACCC
GAAAGTGTGG CGCAAAAGTT AAAAGCCGTG GTGGGGCGCG ATTTTAACTC CGGAGTGGAG
CTATTCGATG CAGCCAAAAT AGAAGGTGAA GAGTACAAAA ACAACGCCGC CATTATTGTT
AAAAAATTAG AAGACCTAAA CCCACTTTGG TATAACGCCC GCTACCCCAA TATGTTTTTT
AAAACAGAAA GCGGTAACCC CAATGTATAT ATAAGAGATA AAGAAACAAA CAAACCAATC
CCTGTGGATA ATGGTTTGCG CGGCTTCCAT CACCACTTTC CTACCAAGCA AGATGTGGAT
AATTTACTAG CGCTAGAATA TTGGCGAGAT TTTGCCGGCG GCCCCGCTTA TAACCAAGCT
TTTGGCTTAG TTGATATGGA ACCACACAAC ACCATACATA TTTGGGTTGG CGGGTTTAAC
CCAAATTACG ATGCTGAAAA AGCGCAAAAC GATAACGCCA AAGACCTACT CGACACCAAT
ATGCCCGGCG ATATGCTCGA TAACTTAACA GCCGGCTTCG ACCCTATATT TTGGCCGCAC
CACGTCAATA TCGATCGCAT TTTTACCATG TGGCAACAGC GTCACCCCAA TCAAGTGCCC
TACGGTATGG ATGTTGCGTT GGTAGGTTTG GGCTACAACA CCCGCGATGC GTTAAATGCA
GAAGCATTGG GCTACGAATA TGTGGATGCA GCGGCGTTTT ACGTCGTAGA TAAAACGCAA
CCCGCAGGCA CAATAAACCT AAATGCAGAG CAAATAAATA AAACCGCGCT GGCAACCTGC
AGGCGTGTTG AATTGCGCTT ACATCAAATA AAACAACCTA CAGAGTCTAT GTATATTCAC
GCGTTTATTA ACGAACCAAG CATAGAGTTA GATACACCGG TTGTAGATAA CGATAAATTC
GCCGGCTATG TAAGCCTGTG GGGCCACGGC AGTTGTGTTG GTGGGCCGGG GCATTGCGCC
GTGCCGGGTG ATGCGGCCGA CCCCTATGAT TTGCGCGGGC CAAATCACAA TGCCAAACGC
AATATATCCC TAGACATAAC CAAAGCGTTG CGCGCAGCGG TTGCGCGCGG GGAACCAAAC
GCGCAAATAT CACTGCGCGC ACTTGATGCT TCGCTCACGC GTATCGCGCA GGAGCTAGAT
GTAGAAGCCG TTTCTATTAA CTACGTTAAC TAA
 
Protein sequence
MTSDVKNKAN ESQQNQSRYQ QVKQILDKAY AAQAIPSYQG LGAFWNTLTY SDFMQFKLYG 
EKLIADKPQK SCCGAEPKTT RAQASGLIKG LRGEFPFNGE QFPALPWATN ALTESDIQFI
ESWINDDCPE QDGVLLAEAS KKEATAVVDP LNLAPSLSNS GNINAFKRSN NEPKQRKNAD
HLTDEEICKL REAFRWARSL NAWPRDRRSL NSWGKLHGDV CAHGFEQFLT WHRMFLYDFE
KNLQDFDPDV TLPFWDWTSP EYDENRDKSK PSNGGIIPKI FRCFITEQAI AELVDEYHLP
ESVAQKLKAV VGRDFNSGVE LFDAAKIEGE EYKNNAAIIV KKLEDLNPLW YNARYPNMFF
KTESGNPNVY IRDKETNKPI PVDNGLRGFH HHFPTKQDVD NLLALEYWRD FAGGPAYNQA
FGLVDMEPHN TIHIWVGGFN PNYDAEKAQN DNAKDLLDTN MPGDMLDNLT AGFDPIFWPH
HVNIDRIFTM WQQRHPNQVP YGMDVALVGL GYNTRDALNA EALGYEYVDA AAFYVVDKTQ
PAGTINLNAE QINKTALATC RRVELRLHQI KQPTESMYIH AFINEPSIEL DTPVVDNDKF
AGYVSLWGHG SCVGGPGHCA VPGDAADPYD LRGPNHNAKR NISLDITKAL RAAVARGEPN
AQISLRALDA SLTRIAQELD VEAVSINYVN