Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0316 |
Symbol | |
ID | 3968584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 391275 |
End bp | 393347 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637919378 |
Product | prolipoprotein diacylglyceryl transferase |
Protein accession | YP_525792 |
Protein GI | 90019965 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.833973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.505044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTAGCG ACGTTAAAAA CAAGGCTAAC GAAAGCCAGC AAAATCAATC GCGCTACCAG CAAGTAAAGC AAATTTTAGA TAAAGCCTAT GCTGCACAGG CTATCCCTAG CTATCAGGGT TTAGGCGCAT TTTGGAATAC GCTCACCTAT AGCGATTTTA TGCAATTTAA GTTATACGGC GAAAAGCTAA TTGCAGATAA ACCTCAAAAA AGTTGCTGCG GTGCCGAGCC AAAAACTACC CGCGCGCAGG CTTCGGGGCT TATTAAAGGC TTGCGCGGCG AGTTTCCGTT TAACGGCGAG CAATTTCCGG CCTTGCCTTG GGCTACCAAC GCGTTAACTG AAAGCGATAT TCAATTTATA GAAAGTTGGA TAAATGATGA TTGCCCAGAA CAAGATGGCG TACTGTTAGC GGAAGCCAGT AAAAAAGAGG CTACTGCAGT TGTCGACCCG CTAAATTTAG CGCCATCGCT TAGCAATAGT GGAAATATCA ACGCCTTTAA ACGCAGTAAT AATGAACCTA AGCAGCGCAA AAATGCGGAC CATCTCACCG ATGAAGAAAT ATGTAAGCTG CGTGAAGCCT TCCGTTGGGC GCGCAGTTTA AATGCATGGC CAAGAGACAG GCGCAGCCTA AACTCCTGGG GTAAGTTGCA CGGCGATGTG TGCGCGCACG GGTTCGAACA GTTTCTTACA TGGCATCGTA TGTTTTTGTA CGATTTTGAA AAAAACCTAC AAGACTTCGA CCCAGATGTA ACCTTGCCCT TTTGGGATTG GACAAGCCCA GAGTACGATG AAAACAGAGA TAAATCCAAA CCCAGTAACG GCGGTATTAT TCCAAAAATA TTTCGCTGCT TTATTACCGA GCAAGCCATT GCCGAATTGG TAGACGAATA CCACCTACCC GAAAGTGTGG CGCAAAAGTT AAAAGCCGTG GTGGGGCGCG ATTTTAACTC CGGAGTGGAG CTATTCGATG CAGCCAAAAT AGAAGGTGAA GAGTACAAAA ACAACGCCGC CATTATTGTT AAAAAATTAG AAGACCTAAA CCCACTTTGG TATAACGCCC GCTACCCCAA TATGTTTTTT AAAACAGAAA GCGGTAACCC CAATGTATAT ATAAGAGATA AAGAAACAAA CAAACCAATC CCTGTGGATA ATGGTTTGCG CGGCTTCCAT CACCACTTTC CTACCAAGCA AGATGTGGAT AATTTACTAG CGCTAGAATA TTGGCGAGAT TTTGCCGGCG GCCCCGCTTA TAACCAAGCT TTTGGCTTAG TTGATATGGA ACCACACAAC ACCATACATA TTTGGGTTGG CGGGTTTAAC CCAAATTACG ATGCTGAAAA AGCGCAAAAC GATAACGCCA AAGACCTACT CGACACCAAT ATGCCCGGCG ATATGCTCGA TAACTTAACA GCCGGCTTCG ACCCTATATT TTGGCCGCAC CACGTCAATA TCGATCGCAT TTTTACCATG TGGCAACAGC GTCACCCCAA TCAAGTGCCC TACGGTATGG ATGTTGCGTT GGTAGGTTTG GGCTACAACA CCCGCGATGC GTTAAATGCA GAAGCATTGG GCTACGAATA TGTGGATGCA GCGGCGTTTT ACGTCGTAGA TAAAACGCAA CCCGCAGGCA CAATAAACCT AAATGCAGAG CAAATAAATA AAACCGCGCT GGCAACCTGC AGGCGTGTTG AATTGCGCTT ACATCAAATA AAACAACCTA CAGAGTCTAT GTATATTCAC GCGTTTATTA ACGAACCAAG CATAGAGTTA GATACACCGG TTGTAGATAA CGATAAATTC GCCGGCTATG TAAGCCTGTG GGGCCACGGC AGTTGTGTTG GTGGGCCGGG GCATTGCGCC GTGCCGGGTG ATGCGGCCGA CCCCTATGAT TTGCGCGGGC CAAATCACAA TGCCAAACGC AATATATCCC TAGACATAAC CAAAGCGTTG CGCGCAGCGG TTGCGCGCGG GGAACCAAAC GCGCAAATAT CACTGCGCGC ACTTGATGCT TCGCTCACGC GTATCGCGCA GGAGCTAGAT GTAGAAGCCG TTTCTATTAA CTACGTTAAC TAA
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Protein sequence | MTSDVKNKAN ESQQNQSRYQ QVKQILDKAY AAQAIPSYQG LGAFWNTLTY SDFMQFKLYG EKLIADKPQK SCCGAEPKTT RAQASGLIKG LRGEFPFNGE QFPALPWATN ALTESDIQFI ESWINDDCPE QDGVLLAEAS KKEATAVVDP LNLAPSLSNS GNINAFKRSN NEPKQRKNAD HLTDEEICKL REAFRWARSL NAWPRDRRSL NSWGKLHGDV CAHGFEQFLT WHRMFLYDFE KNLQDFDPDV TLPFWDWTSP EYDENRDKSK PSNGGIIPKI FRCFITEQAI AELVDEYHLP ESVAQKLKAV VGRDFNSGVE LFDAAKIEGE EYKNNAAIIV KKLEDLNPLW YNARYPNMFF KTESGNPNVY IRDKETNKPI PVDNGLRGFH HHFPTKQDVD NLLALEYWRD FAGGPAYNQA FGLVDMEPHN TIHIWVGGFN PNYDAEKAQN DNAKDLLDTN MPGDMLDNLT AGFDPIFWPH HVNIDRIFTM WQQRHPNQVP YGMDVALVGL GYNTRDALNA EALGYEYVDA AAFYVVDKTQ PAGTINLNAE QINKTALATC RRVELRLHQI KQPTESMYIH AFINEPSIEL DTPVVDNDKF AGYVSLWGHG SCVGGPGHCA VPGDAADPYD LRGPNHNAKR NISLDITKAL RAAVARGEPN AQISLRALDA SLTRIAQELD VEAVSINYVN
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