| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0275 |
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| Symbol | |
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| ID | 3964894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 339858 |
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| End bp | 341009 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637919337 |
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| Product | SPFH domain-containing protein/band 7 family protein |
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| Protein accession | YP_525751 |
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| Protein GI | 90019924 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.660348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0026961 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTTTAT GGAAAGTAAT AGAACTGGCG GATAACGAGC GCGCCTTGTT ATACCGAAAA
AATAAATTAA TAAGCGTATT GCAACCTGGC ACGCATCGCG TTGCTACCTT TAAAGGTGCA
CTGCGCGTAG AGAAGTACGA CATTACCAAG GTGGTGTTTG AACACCCCAA GGCAAAGTTT
CTGTTAAAAC AATATGCAGA TATTCTGGCG CCCAGCATCA AAGCTGTAGA TATAGGCGAG
CAAGAAGTGG GTTTGGTCTA TAGAGATAAT ATTCTTGTAG ATGTGCTTGC GCCCGCTAGC
CATTTGGCTA CTTGGGTTGG TGCAGAAGAC GTGCGAGTGG AAGTAATAGA CATAAGCGAA
AACTTTCGCA TAGACGACAA GCTAGTTGGC TTGCTCGGCC GCGGTGCAAA GGTTGGCCAA
AGCCGAGCTT TGGCACAGGC AATACACTAT GTAGAAGTGC CCGACGAACA GGTAGGTTTG
CTTAAGGTGA ATGGCAAGTT AGAAGCGCTA TTAGAAAGTG GTGCCTATGG GTTCTGGAAG
TACAACCGCT CGGTAGCCGT AAGTTTTTTG GACTTGCGCT TACAAACCAT GGATGTAAGC
GGCCAAGAAA TACTTACCAA AGACCGCGTA AGTTTGCGTA TTAACTTGAG CGCTACCTAT
CGTATAACCG ATGTAAAAAC CGTAGCACTT AAATTAAAAG ACTACGCAAA TTTCGCATAC
TTAGAGCTAC AGCTTAAATT GCGAGAAGCG GTAGGCACAA AAAGCTTAGA TGAACTTTTA
GCCGACAAAG ATTCGCTGAA TGTAGTAATT GCGCAAGCAG TAAAAACACA CTTCGCCGAA
TATGGCATTA GCCTGCAAAG CGTAGGGGTA AAAGACATTA TCTTACCCGG TGACATGAAG
GTAATATTAA ACAAAGTTGT AGAGGCCCAA AAAGAAGCCG AAGCAAACTT AATTAAACGC
AGGGAAGAAA CCCAAGCCAT GCGATCCCTT CACAACACGG CAAAGCTAAT GGAAAACAAC
CCAGTGTTAT TACGTTTAAG GGAATTAGAG TCCTTAGAAA AAGTAACCGA CCGCATAGGC
TCACTAACTG TGTTCGGCGG CTTAGAGAGT GTAATGCGCG ATTTGGTTAA GCTCAACGTC
CCAAGCGTAT GA
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| Protein sequence | MILWKVIELA DNERALLYRK NKLISVLQPG THRVATFKGA LRVEKYDITK VVFEHPKAKF
LLKQYADILA PSIKAVDIGE QEVGLVYRDN ILVDVLAPAS HLATWVGAED VRVEVIDISE
NFRIDDKLVG LLGRGAKVGQ SRALAQAIHY VEVPDEQVGL LKVNGKLEAL LESGAYGFWK
YNRSVAVSFL DLRLQTMDVS GQEILTKDRV SLRINLSATY RITDVKTVAL KLKDYANFAY
LELQLKLREA VGTKSLDELL ADKDSLNVVI AQAVKTHFAE YGISLQSVGV KDIILPGDMK
VILNKVVEAQ KEAEANLIKR REETQAMRSL HNTAKLMENN PVLLRLRELE SLEKVTDRIG
SLTVFGGLES VMRDLVKLNV PSV
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