| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0257 |
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| Symbol | |
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| ID | 3966023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 322472 |
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| End bp | 323545 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637919317 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_525733 |
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| Protein GI | 90019906 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.492639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGACA ATACTATGCA AACAATTGGG GAAAAAAATA GAACAGTAAG GATTTTACTC
CCTTACCTGG CAATACTTGC CACTTTATAC ACCATATATT TTGCTAAATT TATTTTATTA
CCCATTGTAG TAGCCGCTTT TTTTGCGCTG TTTACTAGCC CTTTGGTTGC GCGTTTAGAA
AAGCTTTTTC TACCGCGAGC ATTGTCTGCC ATTATTGTGC TTGTAGGGGT AATAGGCGCA
CTGAGTTTTG TGGCAATGCT ATTTACCAGC CCAGCGCAAC AATGGTGGGA TAAACTGCCA
GAAGTTGCCA ACAGTATGTC TTCGTCTATT GGCGAAGCCA CGCAATCGCT CAATAAAGCC
ACAAGTAATG GCGCTGCAGC GAGCAATACC GATATAGCCA AAGCCAGCGA GAATATTCGC
AATACAACTT TTTTGGCAAT GTTTAAAAGT TTTGCCTCTT CCACGCCCTT GGTGCTTACT
CAAATACTGG GTACGATATT TTTAATCTAC TTCTTTTTAG TACACGGCCA AGTACTGCTA
CTTAGGTTCG TGCAGGCTCG TTCTTCGTTT AGCGACAAAC GCCAAGCAGT CGAGCTACTC
TCTGAAATGC AGCAACAGTT ATCCCGCTAC GTAACCACCA TTACTTGTGT GAATATTGCA
CTGGGCTTTT GTGTAGGCTG TGCATTTTAC ATTATGAAAG TAGAAGACCC GTTTCTTTGG
GGGGCACTAG CCGGCGCCTT GAATTTTGCG CCATATTTAG GGCCGCTAGT GTCTGCCACC
GCATTTGCAT TGGTTGCCTA TTTGCAATTT AATCAAATTG AAATGGCCCT GCTTATCCCT
GGCGTTTATT TATTAATTAA TTTAATAGAA AGCCAGTTTG TAACACCTAC GCTGTTGGGC
TCTACCCTAA ATTTGAATCC GCTAGTAGTG TTTGTATGGC TAGTGCTATG GGGCTGGCTG
TGGGGCGGTT TTGGTATGCT AGTGGGTGTG CCACTATTAG TGTGTTTAAG CATTTATTTA
GAACACACCC GTTTAATAGG CGATTGGCAT ATTCTAATCA AGCAAGAAAG TTAG
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| Protein sequence | MLDNTMQTIG EKNRTVRILL PYLAILATLY TIYFAKFILL PIVVAAFFAL FTSPLVARLE
KLFLPRALSA IIVLVGVIGA LSFVAMLFTS PAQQWWDKLP EVANSMSSSI GEATQSLNKA
TSNGAAASNT DIAKASENIR NTTFLAMFKS FASSTPLVLT QILGTIFLIY FFLVHGQVLL
LRFVQARSSF SDKRQAVELL SEMQQQLSRY VTTITCVNIA LGFCVGCAFY IMKVEDPFLW
GALAGALNFA PYLGPLVSAT AFALVAYLQF NQIEMALLIP GVYLLINLIE SQFVTPTLLG
STLNLNPLVV FVWLVLWGWL WGGFGMLVGV PLLVCLSIYL EHTRLIGDWH ILIKQES
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