| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0195 |
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| Symbol | |
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| ID | 3964773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 250515 |
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| End bp | 252359 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637919255 |
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| Product | UvrD/REP helicase family protein |
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| Protein accession | YP_525671 |
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| Protein GI | 90019844 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCACCA GAATCAACCC CTGTGAATGG AAGCCTCAAG GGGTCGATGA TCTTGAGCCC
AATGCGTGGG AGGGGTTAAG AGAAAACAAG CAACATGCAG CCGTTTTGGC AGGAGCTGGC
GCGGGTAAAA CGGAATTTCT TGCTCAGAAG GCTGCTTATC TTTTGCAAAC GGGTATTTGC
TCGGACCCTA ATAGAATTCT CGCCATTAGC TTTAAAAATG ATGCAGCACG TGTTTTAAAA
GAACGTGTCA ACCTGCGCTG TGCTCCAGAA CAATCAAGGC GATTTGAATC CTTTACTTAC
GATGGATTTA CTAAGTTCCT TTTGGATCGC TTTCGTCTGG CGATACCTGA GCCTTACGCA
CCACCACCCG ATTACAACAT ATACTTTCCA AATAAAGGAA CGTTTCAAGA GTTCTTGAAT
AACCAAAAAA TACGCGGCGT AAATGTCTAC CAGCTTCAGA AAGACATCGC TAACCTGCCT
CTTCCGGCGG GTCAACACAA TTATCTGGCC CTTAAATCAT ATTGGCAGTG TCGTCTGACA
TCTGACGAAG TGGCATTGTC TTTTCAAATG ATAAACCGTT TGATTGAATA CCTTATACGC
TCAAACCCAA ATATTAAACA TGCCTTACGA TCCACTTACC CATTTGTCTT CTTAGACGAA
TTTCAAGATA CAACATCGCC GCAATATGAA CTTTTAAAAT TTATTTTTCT AGAAAGTAAT
AGCCTAATTA CAGCGGTCGG TGATGATAAA CAGCAAATTA TGGGGTGGGC GGGAGCACTA
CCAGAAGCTT TTAATGTATT TAATCAAGAC TTTGGAGCGA AGAATTTCGA CCTCGTTTCT
AACTGGAGAT CACATCCTGA ATTGGTGTCA ATGCAACATG CCATCGCACA GATGATTACC
CCGGGTTTGA CTCAGCCCGA GGCAAAGAAT ACGAAAAATA TGAAAGGGGA CGTAGCGGCG
ATATGGGGGT ATTCCGACCG CAATGATGAA ATTCAAGGTG TTTCAAATTG GATATCTGAA
CAAATCAACT CAGGGACCAA AGCTCATGAA TTAGCAATAC TCGTAAGAAC ACACGCAGAC
AAATTGGAGG TTGAAATTGC ACCACACTTG TTAAATAAAG GTATCTCCAT CAGAAATGTT
GCACGGATAG TGGACGGAAT CGCAATCCAA GATATCTTGA CAGAAAAGCT AACCACAATT
ATTTTGCCTT TTTTATATCT CGGTGTACTA GAAAGGAGTC CGGAAAATTG GAATAGAGCA
CTCATAAGCC TTTGTGCTTT GGAAGGTGTT GATTTCGTAG ATGAAAGAGC ACATAGCCAG
CAGCAAGATC GGCTACAATA TTTTTCAAGA TTATTAAGGC AAGACCTTAG CAACGGTAAT
TTTCATAAAG GTCGAATTAA CCCTACCATC TCATCGATTC TCGCTTTTTT AACTGAAGAC
GCGATAAGAA GTTCTATTTC TGAGTATAAG CAAGACAGAG ATTACAACAG GGTACTCAAT
GGCATTGTTA GCTTGCTTGA AGAGTGCGCG GATTGCTCGT CATCCTGGCT GGAAGCGCTT
GATAGATTTC AAGGTGTCGA TCAAGTTCCG CTGATGACCA TACACAAAAG TAAAGGGCTA
GAGTTTCAGA CCATCATATT TTTTGGGCTT GATGCTAAGA CATGGTGGAG TCTGACACCT
GATAACCCAG AAGAATTGCG ATCATTTTTT GTGGCGTTTA CGCGAGCCAA GCAAAGTACT
TTTTTCACTT CTTGCTCTCA AACAGGGAAT CCCGTTACCT GGATTGAAGA AATCTTAACA
AGTGTTGGTG TTAATAAATT GGCTGGACCT GGTTGCGAAA ATTAA
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| Protein sequence | MVTRINPCEW KPQGVDDLEP NAWEGLRENK QHAAVLAGAG AGKTEFLAQK AAYLLQTGIC
SDPNRILAIS FKNDAARVLK ERVNLRCAPE QSRRFESFTY DGFTKFLLDR FRLAIPEPYA
PPPDYNIYFP NKGTFQEFLN NQKIRGVNVY QLQKDIANLP LPAGQHNYLA LKSYWQCRLT
SDEVALSFQM INRLIEYLIR SNPNIKHALR STYPFVFLDE FQDTTSPQYE LLKFIFLESN
SLITAVGDDK QQIMGWAGAL PEAFNVFNQD FGAKNFDLVS NWRSHPELVS MQHAIAQMIT
PGLTQPEAKN TKNMKGDVAA IWGYSDRNDE IQGVSNWISE QINSGTKAHE LAILVRTHAD
KLEVEIAPHL LNKGISIRNV ARIVDGIAIQ DILTEKLTTI ILPFLYLGVL ERSPENWNRA
LISLCALEGV DFVDERAHSQ QQDRLQYFSR LLRQDLSNGN FHKGRINPTI SSILAFLTED
AIRSSISEYK QDRDYNRVLN GIVSLLEECA DCSSSWLEAL DRFQGVDQVP LMTIHKSKGL
EFQTIIFFGL DAKTWWSLTP DNPEELRSFF VAFTRAKQST FFTSCSQTGN PVTWIEEILT
SVGVNKLAGP GCEN
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