Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0186 |
Symbol | |
ID | 3967971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 235189 |
End bp | 235890 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637919246 |
Product | urease, gamma subunit region |
Protein accession | YP_525662 |
Protein GI | 90019835 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACGAC TGACTTCTAA AGGTGGTGCT AGGTCAATCC CTAAAAATAA CCGAAGCATC ACGGGGCGCG TGTCTTTCCG GGGTGCTGAG GAGTCCCAAC CCTTTGAATC TTCTCTAGAA AGAGATCTTT TGCAGGTAGT TAGCTTTGAT AGAGCGGTGA CAAAGGCGGT ATCTCAGCCT GTGGAAATCG CATTTGACGG ACACAGGCGC TATTTTCCTG ACCTTTTGGT GGAGTATGAG AGCTTCAAAC CTGTGCTATT TGAGGTGAAA TATCGAAAAG ATCTTATGGA AAACTGGCGC GAACTGAAAC CCAAGTTTAA AGCGGCTATT TCCTTCGCCA GTGAGCGAGG CATGATTTTT AGGGTAATCA CTGAAAAGGA AATACGCGGT AATTCTCTGG TTGAGAATGT TCGTTTCTTG AGAGGGTTTA TGGACATTCC TGTGGAGCTC GGTGTGAAGA AATCCATAGT TGAAACTTTG AGGGTGTTAG GTCCTTGCGC GACCCCGAAA ATCTTACTTG AAGCCGCTTT CGACTCAGAT GAATGGCGTT TGAAGGGGCT TAGATGCTTA TGGTTCCTGA TCGCGAATCA GCAAGTGAAA ACAGATTTGT TTAAGAAGCT ATCGATGACC AGTTCAATCT GGATAAACGA GAGGAGCACA TGTCAAATTC CGCTTTCTTA CAGATTAAGA CTGGCTCGAT AG
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Protein sequence | MSRLTSKGGA RSIPKNNRSI TGRVSFRGAE ESQPFESSLE RDLLQVVSFD RAVTKAVSQP VEIAFDGHRR YFPDLLVEYE SFKPVLFEVK YRKDLMENWR ELKPKFKAAI SFASERGMIF RVITEKEIRG NSLVENVRFL RGFMDIPVEL GVKKSIVETL RVLGPCATPK ILLEAAFDSD EWRLKGLRCL WFLIANQQVK TDLFKKLSMT SSIWINERST CQIPLSYRLR LAR
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