Gene Sde_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0142 
Symbol 
ID3965372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp174733 
End bp175857 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content42% 
IMG OID637919201 
Producthypothetical protein 
Protein accessionYP_525618 
Protein GI90019791 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACATA CCACTAACAG CGATGTTTTG ATAATAGGTG CAGGCCTTTC GGGTTTATGC 
CTCGCGCACC AATTAGCTGC TCAAGGAATC TCGTGCAATA TTGTAGATAA AAAGCAGGAT
TACCCAGAGT CATTCCGTGC CGATAAGCTC GAGTACAACC AAATTGATCA GCTGCGCAAA
ATGCACCTAG ATCAGTTTGT AATACCTCAA ATGAAACCTA TTGGAAATAT TCAAAGCTAT
TGTGACGGTC AACTTGAGAC CATTGACACC ATTGACCAGT ATGGCTTTGA CTACACCAAA
ACAGTGAATA ATTTACGTGC AAATTTACCA AGTGGCGTAG CGCTTAAGCT TGGCACTGTT
ACAAATATTA CTACAAGCGC ATCACACCAA ACTGTTTCAC TAAAAGATAA TCAACAATTA
ACTGCTAAGC TAGTAGTAAT TGCCACTGGG GGCAATGAAT CGGTTACTAA GCTTGTAGGT
ATACAACGGA ATTTAATACC TTCACTTACT TCATTAAACT TTGGGTTTGA TGTTAAACGC
AAAGACGGTA AATCATTTGA TTTTCGCGGT TTTAATTACT ACGCCGAGCA ACTTACTAAC
GGTGTTGATT ACATTACATT CTTTTTAATT GGCGACAACA TGCGAGTAAA TATTTTCTCG
CAATGGGATG CCAAAGACCC ACGAGCAAAA GCACTGCGCG CAGATCCACT AGCAGAAATG
CCCAAGCACT TTAAAGAACT TTACAGGTTT GTTGGCGAAC TGGAGTTAGC AAGCAAGGTG
CAGGTTTTCC CCACACACTT TTATCGCACT AGCGGGCACG TTCAGAACGG GTTAGTGGTT
ATTGCCGACG AGTTTCAAAG CGTTAGCCCG GCAACCGGCA AAGGTTTAGA TAAACTAACC
AACGATGTAA CGTTGCTCAG CGAGAAGTAC ATTCCCGCTT GGCTAAGCAA TGGCCGGGCT
AGCAAACGTG ATATAGCCCA GTTTTATAAC GATAAAAGCA AGATAGCTGT GGACCTAAAG
GGAATAAGCG ACTGGATGTA CTACCGCAGG TTATCTACAG GTAAAAAGCC ATCTATTTTG
CAGCGTATTA TCTTTAGGTT AAAGGCTTGC TTTAATACGT TTTAA
 
Protein sequence
MIHTTNSDVL IIGAGLSGLC LAHQLAAQGI SCNIVDKKQD YPESFRADKL EYNQIDQLRK 
MHLDQFVIPQ MKPIGNIQSY CDGQLETIDT IDQYGFDYTK TVNNLRANLP SGVALKLGTV
TNITTSASHQ TVSLKDNQQL TAKLVVIATG GNESVTKLVG IQRNLIPSLT SLNFGFDVKR
KDGKSFDFRG FNYYAEQLTN GVDYITFFLI GDNMRVNIFS QWDAKDPRAK ALRADPLAEM
PKHFKELYRF VGELELASKV QVFPTHFYRT SGHVQNGLVV IADEFQSVSP ATGKGLDKLT
NDVTLLSEKY IPAWLSNGRA SKRDIAQFYN DKSKIAVDLK GISDWMYYRR LSTGKKPSIL
QRIIFRLKAC FNTF