| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0140 |
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| Symbol | |
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| ID | 3965370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 172389 |
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| End bp | 173915 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637919199 |
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| Product | hypothetical protein |
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| Protein accession | YP_525616 |
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| Protein GI | 90019789 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02602] eight transmembrane protein EpsH (proposed exosortase)
[TIGR02914] EpsI family protein
[TIGR03109] exosortase 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATATTC GTGCATTAAC TAGCGAGATT AAATCCAAGG CTTGGGTGCT TGTTACTTTG
CTAGGGGTGG TTGCTTTTGC AGTATTGGCC TATTGGCCTA CTTGGCAGTC TCTACATAAT
GTATGGGCTA TGCTCGATCA AAGCTATTCC CACGGCTATC TTATTGCTCT TGTTGTTCTT
TATTGGTTAT TTAAGGCTGT ATTGCAATAT CAAGCCTCGC CCAAACCTAG CTATGTAGCT
GTGTTAGGCA TTATAGCGTT AGGGGGCTTG TGGCTGTTTG GTGAGGCCAC TCAAACATTG
CTGTTGGCTC AGCTGGCGCT GCCGTGTCTG CTGTGGTTTT CCATTTTTGC CATATTAGGC
CTGCGTTTTG CGGTCAGCGT TGTGCCATTG TTGCTTATAT TTATATTCGC TATACCCCTG
TGGGATATTC TTACGCCAAT ACTGAGGGGT ATTACCACAT ATGTAGTCCA ATTTGGCGTG
TCGATACTGG GAATACCGGC ATACTTCGAT GGCTTTAAAA TAGAAGTGCC GGCTGGTGTG
ATCGAAATTG CATCAAGTTG CGCGGGCTTA AACTACTTTC TTATGGCTAA TGCCTTTGCA
GCCATTTATA GCTATCAGAA CCAATTAGAT ACAAAGCGTA CAATTCTGTG TGCTCTAGTT
GCAACAGCCA TAGCGTTGGT GGGTAACTGG GTACGTGTCT ATATACTTGT TTTAGTGGGG
TATTATTCCA ACATGACCCA CTCATTAATG CACTCGCACG CAAATTTCGG TTGGATACTG
TTTGGCTTAT GCATGGTGCC AATGTTATAT GTATTTGGCC GTATATACGC GACAAGCACC
TGGGCCCAAA GCGCAGCTGA TGAGCCTACA CCGCCCAAAA CCCAAGCAGA CCTTTCTCCA
AAAACGTTTA TTATTAGCGT GTTGCTTGTG TGCTTTTGCT TGGCTTTGGC GCCTGCCACG
CTGCACTGGA ATAGCGTTAA AGGAGATGTG GCAAGCTATG AAGTTTCTAC CATTAACGGT
GCCAAGCTAA GTCAGTATTC TGCTGTTGCA TGGCGGCCCG CTTTTAAAGG GTATGATGCA
CATTATTCTT GGTTGGGGCC TGTAGCTGGT TTGCAGTCGC AACTACAAGT TCTGTTGTAT
ACGCAGCAAG CGCAGGGTAA AGAGCTTATT TATTACGACA ATTTGCTTGC GCCAGCGCAC
AACTTGAAAA AATTAGGCGA CTTCAATGCA AATGGTAATA TGCCGTTAGC AATGGCCGCT
GTAAACTCAG GTGGTCAACA GCGGCTATTA ATTTGGTCCT ACAACTTGGG CGGTAAATAT
ACTACCTCGC CTATCAGCGC AAAACTACTG CAATTTTTAA GCTTGTTTAA TCAGCAACCC
TATGCCGCTC TCGTGGTACT GGTATTTGAC TGCCAGACCA ATTGCACACA GGAGCAGGCA
GTAATAAATG CCTCACCAAG TGAAATAGAT GTAATTTTTT CACAACTAAA CATCAAGGCC
CTAGCGCCCT CAAATAAATG GAAATAG
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| Protein sequence | MHIRALTSEI KSKAWVLVTL LGVVAFAVLA YWPTWQSLHN VWAMLDQSYS HGYLIALVVL
YWLFKAVLQY QASPKPSYVA VLGIIALGGL WLFGEATQTL LLAQLALPCL LWFSIFAILG
LRFAVSVVPL LLIFIFAIPL WDILTPILRG ITTYVVQFGV SILGIPAYFD GFKIEVPAGV
IEIASSCAGL NYFLMANAFA AIYSYQNQLD TKRTILCALV ATAIALVGNW VRVYILVLVG
YYSNMTHSLM HSHANFGWIL FGLCMVPMLY VFGRIYATST WAQSAADEPT PPKTQADLSP
KTFIISVLLV CFCLALAPAT LHWNSVKGDV ASYEVSTING AKLSQYSAVA WRPAFKGYDA
HYSWLGPVAG LQSQLQVLLY TQQAQGKELI YYDNLLAPAH NLKKLGDFNA NGNMPLAMAA
VNSGGQQRLL IWSYNLGGKY TTSPISAKLL QFLSLFNQQP YAALVVLVFD CQTNCTQEQA
VINASPSEID VIFSQLNIKA LAPSNKWK
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