| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0107 |
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| Symbol | |
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| ID | 3966007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 133423 |
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| End bp | 133992 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637919166 |
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| Product | putative phnA protein |
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| Protein accession | YP_525583 |
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| Protein GI | 90019756 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2824] Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism |
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| TIGRFAM ID | [TIGR00686] alkylphosphonate utilization operon protein PhnA |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCATAT TAGCCGACCT ACAGAAACGC GCGTCTTCCA AATGTGAATT GTGCAGTGCA
GAGGGCGAAC TCGCCGTGTA CGAAGTACCG CCAGAAAGCA ACGGCACAGC CGACCAATGC
GTACTACTGT GCCCAACCTG TAGCACACAA ATAGACAACC CCGAGCAAGT AGATGCAAAC
CACTGGCGCT GCCTAAACGA CAGCATGTGG AGCCAAATCC CCGCGGTACA GGTTATGGCC
TATCGCATGC TAAGCCAACT AAGCGCAGAA GGCTGGCCGC AAGATTTGCT AGATATGCTC
TACCTCGACG ACGACAACCT AGCCTGGGCC AAAGCCGGCT TGCCATCCGA AGATGATGTA
GTACACCGCG ACTGCAACGG CGCCATCCTC GCCGCCGGCG ATAGCGTAAC CCTAATAAAA
GACCTAAACG TAAAAGGCGC AAACTTCACT GCAAAACGCG GCACCGCCGT ACGCGGCATA
TCATTAGTAC AAGATAACCC CGAACACATA GAAGGCCGCG TGAACGACCA GCGTATTGTT
ATTCTTACTA AGTTTGTTAA GAAGAATTAG
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| Protein sequence | MSILADLQKR ASSKCELCSA EGELAVYEVP PESNGTADQC VLLCPTCSTQ IDNPEQVDAN
HWRCLNDSMW SQIPAVQVMA YRMLSQLSAE GWPQDLLDML YLDDDNLAWA KAGLPSEDDV
VHRDCNGAIL AAGDSVTLIK DLNVKGANFT AKRGTAVRGI SLVQDNPEHI EGRVNDQRIV
ILTKFVKKN
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