| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0105 |
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| Symbol | |
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| ID | 3966005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 131002 |
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| End bp | 131901 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919164 |
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| Product | hypothetical protein |
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| Protein accession | YP_525581 |
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| Protein GI | 90019754 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTAA GATTAAAATT CAACCTAGTT ATGTTAATAA CACTGGCTAT AGGAATTGGC
TTGGCGTACA TAACCAGTAA ACGCATCCTT GAAGACAATG CCAAGCAAGA AGTGCTGCTT
AACGCAGACA TAATGATGGA AATGGCCAAA GGCATTCGCG GCTACACCGT GGATGAAGTA
AAGCCAATAA TTCAGGCTGG CGGCCACGAA GAATTCATTA AACAAACGGT GCCTGCCTAT
GCGGCCACCC GCAATTTCGA GCGTTTGCGC AAGCGCTTCC CAGAATTTAC CTACCAAGAA
GCCACGCTTA ACCCAACTAA CCCCGCGCAC CGGGCCACCG ATTGGGAAAA AGGCATAGTG
GATTACTTTA CCAGTAACCC CAGCGCCACC GAATACAGCG GCATTAAAGA AACCGCTACA
GGCAAGCTGC TTTACACAAG TCACCCCCTG CGTATTACCA ACCCAAAGTG TTTAGATTGC
CACAGCACCC CAGAAGCTGC GCCTGCCGCC ATGCTAGAGC TGTACGGTCG CGAAAACGGC
TTTGGCTGGG AATTAAATAG CGTAGTAGGT GCACAGATAG TTTACGTGCC AATGAGCATA
CCCTTAGAGC GCGCTCGCAT AGCTTTAAAA ATATTTATTA TTTCGCTTAC GGCTATTTTT
GTATTTATTT GGCTATTGCT AAATATTCTA TTGCACTTTG TGGTTATTCG ACCTGTGACG
CGTATGGCAG AACAAGCAAA TTTAATCAGC AAGGGCCAAA TAGATGTGCC AGAGTTTGAA
GTAAAAGGCA GTGATGAAAT CGCCTCCATG GCATCATCAT TTAATCGCAT GCACCGCAGC
TTAGCTAGCG CGGTAAAACT TATTAAGAAA CAACGCACAA CAACTGTACG CAGCAAATAG
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| Protein sequence | MSLRLKFNLV MLITLAIGIG LAYITSKRIL EDNAKQEVLL NADIMMEMAK GIRGYTVDEV
KPIIQAGGHE EFIKQTVPAY AATRNFERLR KRFPEFTYQE ATLNPTNPAH RATDWEKGIV
DYFTSNPSAT EYSGIKETAT GKLLYTSHPL RITNPKCLDC HSTPEAAPAA MLELYGRENG
FGWELNSVVG AQIVYVPMSI PLERARIALK IFIISLTAIF VFIWLLLNIL LHFVVIRPVT
RMAEQANLIS KGQIDVPEFE VKGSDEIASM ASSFNRMHRS LASAVKLIKK QRTTTVRSK
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