| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0087 |
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| Symbol | |
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| ID | 3967326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 108353 |
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| End bp | 110155 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919146 |
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| Product | hypothetical protein |
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| Protein accession | YP_525563 |
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| Protein GI | 90019736 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1357] Uncharacterized low-complexity proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTTT GTATGCCACA AAATATGAAT CGCGTTATGC AGCACACCTT ATCTACGGGC
AATACCAAAA CCATGGACTC ACTGAGTGAA TTAACCAAAA TCATCACCCA GGGCGCATTA
GTGTGGAACA AGTGGCGTCG CGCTAACCCA AGCATAACGC CTGTACTCGA TGGCATAGAG
CTCACCAACC TCGTTTTAGA CGGTATAGAT TTTTCGGGTT TATCATTTAA CAATGCACAT
ATTACCCAGT GCAGTTTTAA AAATGCCCGC CTTATTAGCA CCTCGTTTCG CGGTGCTACC
TTAATTAAAA ACGATTTCAG CAACGCCAAA CTTATTGCCG CCAACCTGCA AGAAACAAAT
TTAACCGATT GTGTTATTCA AGGGGCCAGT ATTTTTACGG CCAATACCCG CGGCGCGTGC
ATGCAAAAAA TGGATTTTCG CGGCCACGAT TTAGGCGGCT TAAATTTGCA GGGCTGTTCA
TTTGCGCGCA GCAATCTAGA GGGGCAAGTG TTAGCCAAGC TAGACTTATC TGGTTTAGAT
TTAGAAGATG CAAACCTTAC CGGTGCAGAT CTTTCTTATA CAAACTTCTC TGGTGCTAAC
TTGCGCCGAG CAGATTTACG CGATGCAAAA TTTTGTTCCA CCAATTTTAA AAATGCAGAA
TTAAATGGCG TAGATTTACG TAAAGCCGAT TTGAGCGGTT TGGAATTTGA TGGCGCCGAC
CTAACCGGTT GCGATTTGCG CGAAGCAAAG TTGGTGGGAG CCAGTTTAGA AAAGGCCAAT
ATTACCGGCA CCAAATTGTG GAAAATAGAA ATGAAGGGCT GGAAGATAGC CCACATTCGC
TGCGACTTTG CCCTGTGGGG TAGCACGGGT AAATCCAAAA CAACGTATCG CCGCCACGAA
TTTGAGCGCT TGTATACGCA AGCGGCCACA ATAGAACTAA AATACCCACA CCGTTTATCG
TCGCAAGAAA TTGCCACCAT TCCCATTCTT ATTGAACATT TGCAGGCAAC CCACTGGGGC
GTAATTCTTC GCTTAAAAAC TATTGTAGAA GTTGCCGGTG GAACATTGGT TGCGTTTAAT
ATAGAAGAAT ACGGCCAACT CAACCCAACC AAATTAAAAG AAGAGCTACA AAAAGAAGCC
GAACGCATTT TAAGCGCGCA CTTAGTGTTG CGCACCAACA CCAAAATGCT TATTGAACTA
AAAGAAGAAA TAGCTCAAAT AAAAGAACGC TTTTGGCCGC GCCTATTAGA ATTGGCTGCC
GAACACGAAC GCGAGCAAAT AAGAATGCTT ACCGTAGTGT TTATGGATCT AAAAGGCTTT
TCTTCCTGGG GGCAAGACGA ACTTTCCGAT AAGCTCGCAC TGTTTCGCGG CCTTATTAAA
CCTATCTTAA AAAAATGGCA AGCGGGCTAC CCCAATATGG AAGGTGACTC TTTGCGGGTG
ACCTTCCGCA ACGCCTCTGC CGCACTGGCC TGCGCCTGCA TGATTCAAGG CGTACTAACT
GCAGCAGGTT TTGAAGTACG CGTAGGTGTA GAGTTGGGCG AAATTGCCGT GGTACACAAC
GAAGTTACCG AGCTTTCAGA TTTAGAAGGC ATTGCAGTAA GCATGGCCGC CCGCCTAGAA
GCTGCCGCAG AACCCGGTCA AGTACTCGCC TCCGACCGCG TAAAACACTA CAGCGAACAC
CGCGACCTAT TCTCCTTCGA GCCAGTAAAA GTAAAACTTA AGAAAAGCAT TGGCGATATT
AAACAAGGCC AAGTGGTAGA GTGCTACTCG GTTAAAATGT TGAACCCACT GCAAGAAATT
TAA
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| Protein sequence | MAFCMPQNMN RVMQHTLSTG NTKTMDSLSE LTKIITQGAL VWNKWRRANP SITPVLDGIE
LTNLVLDGID FSGLSFNNAH ITQCSFKNAR LISTSFRGAT LIKNDFSNAK LIAANLQETN
LTDCVIQGAS IFTANTRGAC MQKMDFRGHD LGGLNLQGCS FARSNLEGQV LAKLDLSGLD
LEDANLTGAD LSYTNFSGAN LRRADLRDAK FCSTNFKNAE LNGVDLRKAD LSGLEFDGAD
LTGCDLREAK LVGASLEKAN ITGTKLWKIE MKGWKIAHIR CDFALWGSTG KSKTTYRRHE
FERLYTQAAT IELKYPHRLS SQEIATIPIL IEHLQATHWG VILRLKTIVE VAGGTLVAFN
IEEYGQLNPT KLKEELQKEA ERILSAHLVL RTNTKMLIEL KEEIAQIKER FWPRLLELAA
EHEREQIRML TVVFMDLKGF SSWGQDELSD KLALFRGLIK PILKKWQAGY PNMEGDSLRV
TFRNASAALA CACMIQGVLT AAGFEVRVGV ELGEIAVVHN EVTELSDLEG IAVSMAARLE
AAAEPGQVLA SDRVKHYSEH RDLFSFEPVK VKLKKSIGDI KQGQVVECYS VKMLNPLQEI
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