| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0064 |
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| Symbol | |
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| ID | 3967148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 78862 |
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| End bp | 80547 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919123 |
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| Product | putative secreted beta-mannosidase |
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| Protein accession | YP_525540 |
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| Protein GI | 90019713 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000582452 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAACA AGATATCTAC ACCCGCGTTA AGCGGTTGGA GCAAGGCTGC GCGCTATTTA
TGCCATACGG CTACTGGCGC ATTAATGTTG GCTGCAAGTA CGGTAAATGC GGGGTTTAGC
GTTTCGGGTA CGCAGCTGTT AGATGATAAC GGCCAAGCGT TTATTATGCG CGGTGTTAAT
CATCCGCATG CGTGGTACGC CAATCAAACC AGCTCGTTTG CTGATATAGC TTCAGTAGGT
GCTAATACGG TTCGAGTGGT ACTAAGCGAT GGCCAGCAAT GGACGCGCAA CAGCGCATCT
GATGTGGCGA ATGTTATCTC GCTATGTAAA GCAAACAAGT TAGTGTGTGT TCTTGAGGTA
CACGATGTAA CCGGTTCAGG CGAGGCCAGT GCGGCGGGTA CCTTGGCAAA TGCGGCCCAG
TATTGGGTAG ATATTGCCAA CGTGCTTAAG GGGCAAGAAG ATTACGTAAT AATCAATATT
GCCAACGAAC CGTTCGGCAA CAATGTGCCT GCCAGTAATT GGATTAACCA GCACAAAGCG
GCTATTCAAA CGCTGCGAGC GGCCGGTTTA ACCCACACGC TAATGATAGA TGCGGCAAAC
TGGGGGCAAG ATTGGCAACA AGTAATGCTA AACAATGCTT CAGAGGTGGC ACAGGCCGAT
AGCCTAAGTA ACACCATGTT TAGCGTGCAT ATGTATCAGG TTTACAACAA CTTAAGCACC
GTAGAAAACT ATGTGTCTAC GTTTTTAAGT AGCCATAACT TGCCGTTAAT AGTGGGGGAG
TTTGGTGCAG ATCACCAAGG TGAAGAGGTT GATGAAGATG CAATTTTATC TGTGGCAGAG
CAGTATGGCA TTGGCTACTT AGGCTGGAGT TGGTCGGGCA ATGGCAGTTG TTGCGGCACC
TTAGATATAA CCAACAACTT TAACGTTAAC AGTTTAACCA GTTGGGGTAA CCGCCTAATA
AACGGTACCA ATGGTATTAA AGCAACCTCG GTAATTGCAT CTGTATACGG TGGCTCGTCG
AGCAGTTCTA GTTCATCTAG TAGCTCTTCA ACTAGCTCTA GCAGTTCCAG TTCTTCTACC
AGTTCATCCA GCAGTTCGTC CGGTTCTAGT GGTGGTGCGC AACAGTGTAA TTGGTACGGC
TCGGTTTACC CATTGTGTAA TAATCAAGCC AGTGGTTGGG GCTGGGAAAA TCAGCAAAGC
TGTATTGGCC GTACTACCTG CGAAAGTCAG TCTGGTAATG GCGGAGTTAT TGGCGGGTCT
TCGTCGAGCA GTTCTTCTAG TAGTTCATCA AGCAGTTCTT CTAGCAGCTC ATCCAGTAGC
AGTTCTAGCT CATCTAGCAG CAGCTCGTCG TCCTCAAGTT CTTCTTCTTC TAGTAGTTCA
TCGGGCGGCA GTGGTGCAAC TTGCGAACAC ATAATTACAA ATAGTTGGAA CAGCGGTTTT
CAAGGGGCGG TGCGCATTAC CAATAATGGC AGCAGTGCCA TTAACGGCTG GCAAGTAAGT
TGGAGCTACA GTGATGGCAC AACCATTGGC AGTGTATGGA ATGCCAATCA AAGCGGTAGC
AACCCTTACA CAGCCAGCAA TTTAGGGTGG AACGCCACGG TTAACCCTGG GCAGTCGGTA
GAGTTTGGTT TTACTGCCAA CGGCGGCGGT GCTGCATCAG CAGTGACGGG GTCGGTTTGT
AACTAA
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| Protein sequence | MFNKISTPAL SGWSKAARYL CHTATGALML AASTVNAGFS VSGTQLLDDN GQAFIMRGVN
HPHAWYANQT SSFADIASVG ANTVRVVLSD GQQWTRNSAS DVANVISLCK ANKLVCVLEV
HDVTGSGEAS AAGTLANAAQ YWVDIANVLK GQEDYVIINI ANEPFGNNVP ASNWINQHKA
AIQTLRAAGL THTLMIDAAN WGQDWQQVML NNASEVAQAD SLSNTMFSVH MYQVYNNLST
VENYVSTFLS SHNLPLIVGE FGADHQGEEV DEDAILSVAE QYGIGYLGWS WSGNGSCCGT
LDITNNFNVN SLTSWGNRLI NGTNGIKATS VIASVYGGSS SSSSSSSSSS TSSSSSSSST
SSSSSSSGSS GGAQQCNWYG SVYPLCNNQA SGWGWENQQS CIGRTTCESQ SGNGGVIGGS
SSSSSSSSSS SSSSSSSSSS SSSSSSSSSS SSSSSSSSSS SGGSGATCEH IITNSWNSGF
QGAVRITNNG SSAINGWQVS WSYSDGTTIG SVWNANQSGS NPYTASNLGW NATVNPGQSV
EFGFTANGGG AASAVTGSVC N
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