| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0053 |
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| Symbol | |
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| ID | 3965361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 57877 |
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| End bp | 58857 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637919112 |
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| Product | phospholipase/lecithinase/hemolysin-like |
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| Protein accession | YP_525529 |
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| Protein GI | 90019702 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.687588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATTT ATAGCCGTTT AATCGCGACA GGCCTGTTGC TACTTTCTGG GTTTAGTTTC
GCGCATTCAA ATCACAAAAC CGATTTAATT GATCAGCCGC AACAGGGCTT TGGTGAATTG
GTAATTTTCG GTGGTGTATT TACCGATACG GGAAACTTTG CATCGTTGTA TGGCGATCTA
CCAGGCATTT TTTGGAACAA CCGGTTTGCA AATGGCCCTG TTATTTCAGA TTACATGGCA
GAAACATTGG GTTTAAGCGC TAGCCCTTCG CTGCATGTTG CCGGTGAAGT TAGCGAGCCT
ATGGGAACAA ACTATTCCAT GCGCAATGCA TGGGCAGGCC AAAGCGGTGA GTTAAATATA
AGTGGCCAAG TGCAGACTTA TTTAGCAAGC AAAGACTACA GCGTACCCGC CGATAGTTTA
ATTTTTATGT GGGCAGGTAG CCACGATGTA GTTGAAGCCA TTACCACACC TGCGCCTTTA
CCATACCAAA TGCTAGACGA CGCCGTGTTT GGAATAGAAG CACAGTTGTA TTTGCTTATT
GATAGCGGAG CGCAGCATAT ATTTGCTCCT ACTTTTGCCG ATATTGGTTT TTTACCGGCT
ATGCAGCGCA GAGGTATTGA AGCGCGTGTT ACCGAAGCAA CCGACTATTT TAATCGCAAG
TTTTCTAGAA TGCTTAATCG TGTAGAGCGC AACACTGGCC AGCGAATTTA TCGGTTTGAT
TTTGATCGCT ATGTAAAAGG GTTAGTTGCT AATGCGGGTT TTTACGGAAT CAAAAATAGC
GTTGATGTGT GTGTAGAGCA ATTGGCTACT GGCGGCTGCG ATTTCAACAG CTTTTTGTTT
ATGACCGATG TGCTTATTAC CAGTAAAACT CACAAACTCA TTGCCGATGC ATTTACCCAA
GATTTATTGC ACCAAGTAAG TTACTGCAAG CGCGGCAATT ACCATCGCAG AACAAAACAT
CACTTGTGCC CAAGTAACTA G
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| Protein sequence | MKIYSRLIAT GLLLLSGFSF AHSNHKTDLI DQPQQGFGEL VIFGGVFTDT GNFASLYGDL
PGIFWNNRFA NGPVISDYMA ETLGLSASPS LHVAGEVSEP MGTNYSMRNA WAGQSGELNI
SGQVQTYLAS KDYSVPADSL IFMWAGSHDV VEAITTPAPL PYQMLDDAVF GIEAQLYLLI
DSGAQHIFAP TFADIGFLPA MQRRGIEARV TEATDYFNRK FSRMLNRVER NTGQRIYRFD
FDRYVKGLVA NAGFYGIKNS VDVCVEQLAT GGCDFNSFLF MTDVLITSKT HKLIADAFTQ
DLLHQVSYCK RGNYHRRTKH HLCPSN
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