| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0017 |
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| Symbol | |
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| ID | 3968836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 19328 |
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| End bp | 20776 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919076 |
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| Product | potassium uptake protein TrkH |
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| Protein accession | YP_525493 |
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| Protein GI | 90019666 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000733585 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACTACG CCATCATTTC TAAGGTACTT GGCATACTAT TAATGCTATT TAGCTTAACC
ATGGTGCCGC CCATATTTGT TTCATTGTTT TATAAAGATG GCGCCTACCT CAGCTTTATT
ATGGCTTTTG CCATTACCTT TAGTACCGGC GGCTTGGCGT GGTTGCCCGT CTACCGCGTG
CGACAGGATT TGCGCACCCG CGACGGCTTT TTAATTACCT CTCTATTTTG GTCGGTACTG
GGCATATTCG GTTCGCTGCC GTTTATATTG GCCGAGGCCA CCCAACTAAC CGCCGTCGAC
GCGGTGTTTG AATCTCTTTC TGGCCTCACT ACCACTGGGG CCACAGTACT TACCGGCTTA
GACTTTTTAC CTAAATCTAT TCTCTACTAC CGCCAGCAAC TGCAGTGGTT GGGGGGCATA
GGTATTATTG TTATCGCCGT GGCGGTACTG CCTATGCTAG GTATTGGTGG TATGCAGTTG
TACCGCGCCG AAACCCCAGG CCCAGTAAAA GACAGCAAAC TCACCCCGCG CATCACCGAA
ACCGCCAAGG CGCTGTTCTT TATCTATGTA AGCCTTACCC TCGCCTGCTT ATTCGCCTAT
TGGGCCGCCG GTATGAGCTT GTTCGACGCC ATAGGCCACG CTTTTGCCAC CGTCGCAATT
GGTGGCTTTT CCACCCACGA TTTAAGCATT GGCTATTTCG ACAGCCCACT TATTATGCTT
ATTTGCATGG TATTTATGGT GCTCTCTGGG GTTAACTTCG CGCTGCACTT TTACGCGTGG
CAGGCGCAAA CCATACGCCA TTACCTGCAA GACCCCGAAT TCAAATTTTA CGCATCCATG
ATTTTGCTAG GCGTGTTTAT TACTGTGAGC TATCTATTTG GCAAAGGTAC CTACGGCCTT
AGCGAAAGCG CCATAAAAGG CAGCTTCGAG CTAATCTCGG TGCTAACCAC CACCGGTTTT
GGCGTTGCGG ATTTCTCTCT GTGGCCCACC TTCTTACCTT TTTTAATTTT TATGTTTGCT
TTTATGGGCG GCTGCGCAGG CTCTACGGGT GGGGGCATCA AAATGATGAG GGTACTGCTC
ATTATGAAAC AAGGGGTGCG CGAAATTCAC CGGTTGATCC ACCCGAACGC GGTTATTCCC
ATAAAAATAG GCACCAAAAG TGTTTCAGAC AGAGTCGTAG AGGCGGTTTG GGGTTTCTTT
GCAATTTACG TAATAGCCTA CCTCACAATG ACCATTGTGT TATTGGCAAC AGATCTAGAC
TTCGTAACCG CATTTACGGC TGTGGGTGCA TGCTTGAACA ACTTAGGCCC GGGCTTGGGC
AGTGTGGCTT CCCACTATGG CGACTTAAAC TCTGCCGCCA AGTGGGTGTT GTGTTTTGCC
ATGCTGTTGG GGCGTTTAGA GGTTTTCACC CTTTTAGTGT TATTTACCCC GATGTTTTGG
CGAAGATAG
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| Protein sequence | MHYAIISKVL GILLMLFSLT MVPPIFVSLF YKDGAYLSFI MAFAITFSTG GLAWLPVYRV
RQDLRTRDGF LITSLFWSVL GIFGSLPFIL AEATQLTAVD AVFESLSGLT TTGATVLTGL
DFLPKSILYY RQQLQWLGGI GIIVIAVAVL PMLGIGGMQL YRAETPGPVK DSKLTPRITE
TAKALFFIYV SLTLACLFAY WAAGMSLFDA IGHAFATVAI GGFSTHDLSI GYFDSPLIML
ICMVFMVLSG VNFALHFYAW QAQTIRHYLQ DPEFKFYASM ILLGVFITVS YLFGKGTYGL
SESAIKGSFE LISVLTTTGF GVADFSLWPT FLPFLIFMFA FMGGCAGSTG GGIKMMRVLL
IMKQGVREIH RLIHPNAVIP IKIGTKSVSD RVVEAVWGFF AIYVIAYLTM TIVLLATDLD
FVTAFTAVGA CLNNLGPGLG SVASHYGDLN SAAKWVLCFA MLLGRLEVFT LLVLFTPMFW
RR
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