| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4223 |
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| Symbol | secY |
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| ID | 3961941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4695276 |
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| End bp | 4696586 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919037 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_525441 |
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| Protein GI | 89902970 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0505149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAACTA ACGCGACACA ACTGGCAAAA AATGGCAAAT TCGGCGACTT GCGTCGACGG
CTTGTCTTTC TGCTGCTTGC CCTGGTCGTG TACCGAGTGG GTGCACATAT TCCCGTTCCA
GGTATTGACC CAGTTCAGCT AGCGCAGTTC TTCAAGGGTC AGCAGGGCGG GATTCTGGGC
ATGTTCAACA TGTTCTCGGG CGGGGCTTTG TCGCGTTTTA CCGTGTTCGC ATTGGGGATC
ATGCCGTATA TATCGGCATC GATCATCATG CAGTTGTTGA CCTACGTGCT GCCTGCATTC
GAGCAATTGA AAAAAGAGGG CGAAGCAGGT CGGCGCAAGA TTACGCAGTA CACCCGCTAC
GGCACCCTTG GTCTGGCACT GTTTCAATCC ATGGGGATTG CCATTGCGCT TGAAAGCTCG
CCGGGGTTGG TAATTGCCCC TGGATTTGGA TTTCGCATGA CTGCGATCGT GACTTTGACA
TCAGGTACCT TATTTCTGAT GTGGTTAGGC GAACAGATCA CAGAGCGGGG TTTGGGTAAT
GGCATTTCTA TACTTATTTT TGGCGGTATA GCAGCCGGTC TGCCGAACGC TATCGGTGGG
TTGCTTGAGC TTGTTCGAAC AGGGGCGATG AGCATTATTG TTGCCCTCTT CATAGTGATC
TTGGTCGCGC TGGTTACCTA TTTTGTTGTT TTTGTAGAGC GTGGCCAGAG AAAAATCCTG
GTTAACTATG CAAGACGACA GGTCGGTAAT AAAGTTTATG GTGGACAGTC GTCACATTTG
CCCTTGAAGC TGAATATGGC AGGGGTAATC CCGCCGATTT TCGCTTCGTC TATTATTTTG
CTGCCAGCAA CTGTGGTGGG TTGGTTTAGC GCCGGTGAGT CCATGCGCTG GTTGAAAGAC
ATTGCAGGAT CTCTCACACC AGGGCAGCCT ATCTACGTGA TGCTTTACGC AGCGGCAATT
ATATTTTTCT GCTTTTTCTA TACGGCACTT GTATTTAACA GCCGTGAAAC TGCTGATAAT
TTGAAAAAGA GTGGCGCATT TATTCCAGGT ATTCGGCCGG GTGACCATAC CGCCAAATAC
ATTGACAAAA TTTTGCTTCG TCTGACTTTT GCTGGCGCTA TCTACATCAC AATGGTTTGT
TTGTTGCCAG AGTTCCTGAT CTTGAAGTAC AACGTACCGT TCTACTTCGG TGGAACGTCA
CTTCTGATCA TCGTCGTTGT GACTATGGAT TTCATGGCAC AGGTGCAGAA CTACATGATG
TCGCAGCAAT ATGAATCGCT GTTGAAGAAG GCTAATTTCA AGTCTTCATA A
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| Protein sequence | MATNATQLAK NGKFGDLRRR LVFLLLALVV YRVGAHIPVP GIDPVQLAQF FKGQQGGILG
MFNMFSGGAL SRFTVFALGI MPYISASIIM QLLTYVLPAF EQLKKEGEAG RRKITQYTRY
GTLGLALFQS MGIAIALESS PGLVIAPGFG FRMTAIVTLT SGTLFLMWLG EQITERGLGN
GISILIFGGI AAGLPNAIGG LLELVRTGAM SIIVALFIVI LVALVTYFVV FVERGQRKIL
VNYARRQVGN KVYGGQSSHL PLKLNMAGVI PPIFASSIIL LPATVVGWFS AGESMRWLKD
IAGSLTPGQP IYVMLYAAAI IFFCFFYTAL VFNSRETADN LKKSGAFIPG IRPGDHTAKY
IDKILLRLTF AGAIYITMVC LLPEFLILKY NVPFYFGGTS LLIIVVVTMD FMAQVQNYMM
SQQYESLLKK ANFKSS
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