| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4159 |
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| Symbol | |
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| ID | 3961857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4630071 |
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| End bp | 4630739 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637918979 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_525384 |
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| Protein GI | 89902913 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03004] ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTCG ATTTCTCCCC CGTTTTTTCT GGCTGGCGCA ACCTGATTCA AGGGGCATCG
GTCACGGTTG AAATTACGGC GATGGCGCTG GTGCTTGGCT GCGTCATGGG CTTGCTGGTG
GGAATCGGGC GCCTCAAGCC GGAGCGGCGC GTCATCTATG CGCTGTGCAC CAGCTATGTG
GCGGTCATTC GCGGCACGCC GCTGCTGGTG CAATTGTTTC TTCTGTTTTT TGGCTTGCCG
CAGTTCGATA TCCTGTTGCC GGCGTTTGTC TGTGGCGTCA TCGGGCTGGG CATTTACTCT
GGCGCCTACG TGTCGGAAAT CGTGCGCGGC TCCATCCAGT CGATTGACCG GGGCCAGATG
GAGGCGGCAC GCTCGGTGGG CATGTCCTAT GGCACGGCCA TGCGGACCAT CATCCTGCCG
CAGGCGCTGG TGCGCATGAT TCCACCACTG GGCAACGAGT TCATTGCCTT GATCAAGAAT
TCCGCGCTGG TGTCACTGCT CACCATTCAC GACGTGATGC ATGAGGGACA GAAAATCATC
AGCGTGACCT ACCGCTCGCT GGAAGTCTAT CTGGCCATTG CCGCCATCTA TTTTGTTTTG
ACCGGCTTGA CGACGCTGGC GTTGCGCCGC ATCGAGCAGC GACTTCGTGC GGGAGGCATG
GTGCAATGA
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| Protein sequence | MELDFSPVFS GWRNLIQGAS VTVEITAMAL VLGCVMGLLV GIGRLKPERR VIYALCTSYV
AVIRGTPLLV QLFLLFFGLP QFDILLPAFV CGVIGLGIYS GAYVSEIVRG SIQSIDRGQM
EAARSVGMSY GTAMRTIILP QALVRMIPPL GNEFIALIKN SALVSLLTIH DVMHEGQKII
SVTYRSLEVY LAIAAIYFVL TGLTTLALRR IEQRLRAGGM VQ
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