| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4136 |
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| Symbol | |
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| ID | 3961834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4609858 |
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| End bp | 4610577 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637918958 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_525363 |
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| Protein GI | 89902892 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCC AAAAGACAAT GCTTCCCGCG CCCCTTGATG TCAGCTCCGA CGCGGAGCTG
GTCGATCTGG CTATTGCCGG CCATGATGCG GCGTTTTCGC AGATCATGCG GCGCCACAAC
CGTTTGTTGT TTCGCACAGC GCGCGGCATC CTCAAGAACG ACGACGACAC GCAGGATGCC
TTGCAGGAAG CCTATCTGCG CGCCTGGCGC GCGCTGGCCA GCTTTCGCTC TGACGCCCGG
CTTTCCACCT GGTTGGTGCG CATCGTGGTC AATGAAGCGC TGGGGCGGCT GCGGCGCTCT
GGCGTCCAGC CCGCCCAGGT CTTGCCGCTC AATGCGGCGA TCGACCCAGA TGGCGAAACC
CCGGAGATGC AGATGCAGGC CAATCCCGAT GACCAGCCCG AGCCCACCGC CGTGCGGGCA
CAGATACGCC AGCAGATCGA GGCCCGGATT GACTCCTTGC CCGATTCGTT TCGCAGCGTT
TTCATGCTTC GGGGGGTCGA GGAATTGAGC GTGGAGGAAA CCGCCCTGGC GCTGGATATT
CCCGAGGCCA CCGTACGCTC CCGGTTTTTT CGTGCCCGCG GCATTTTGCG CGAAGGCCTT
TCACGCGACA TCGACATGGC CATCGGTGAC GCATTTTCAT TTGCCGGCCC GCGCTGCGAC
AGGATTGTCG AGGGTGTGCT GGCCAGGATT GCCCACGAAC GTGAATCTTC CCGCTCGTGA
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| Protein sequence | MNTQKTMLPA PLDVSSDAEL VDLAIAGHDA AFSQIMRRHN RLLFRTARGI LKNDDDTQDA
LQEAYLRAWR ALASFRSDAR LSTWLVRIVV NEALGRLRRS GVQPAQVLPL NAAIDPDGET
PEMQMQANPD DQPEPTAVRA QIRQQIEARI DSLPDSFRSV FMLRGVEELS VEETALALDI
PEATVRSRFF RARGILREGL SRDIDMAIGD AFSFAGPRCD RIVEGVLARI AHERESSRS
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