Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_4131 |
Symbol | |
ID | 3961829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 4606350 |
End bp | 4606697 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637918955 |
Product | alkylhydroperoxidase |
Protein accession | YP_525360 |
Protein GI | 89902889 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAGTT CCATTTACCC CCATGCAGGT GCCGAAGTCG CGCGCAAACG CCGTGAACTC GCGCCCAACC CGCTGGACGC CTTCAAGGCC TTCAGCGCCA GCGTCTTTGC CGACGGCGCC TTGCCCAGCA AGACCAAGCA GCTGATCGCG GTGGCCGTGG CACACGTGAC CCAATGTCCG TATTGCATTC GCGGCCATAC GCAAACGGCA CTGAAGGCGG GCGCCACCGA GCAGGAGCTC ATGGAGGCCA TCTGGGTTGC GGCCGAGATG CGCGCTGGTG CGGCCTACGC GCACTCGGCG CTGGCCATCG ACACCATGCT GCACGCGCAC GACGCCAAGC CAAGCTGA
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Protein sequence | MDSSIYPHAG AEVARKRREL APNPLDAFKA FSASVFADGA LPSKTKQLIA VAVAHVTQCP YCIRGHTQTA LKAGATEQEL MEAIWVAAEM RAGAAYAHSA LAIDTMLHAH DAKPS
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